Puntigrus tetrazona (Sumatra barb): 122324771 Help Entry 122324771         CDS       T08985                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism ptet  Puntigrus tetrazona (Sumatra barb) Pathway ptet04115   p53 signaling pathway ptet04145   Phagosome ptet04148   Efferocytosis ptet04350   TGF-beta signaling pathway ptet04510   Focal adhesion ptet04512   ECM-receptor interaction ptet04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ptet00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     122324771 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122324771 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     122324771 (thbs1b)    04148 Efferocytosis     122324771 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     122324771 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     122324771 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122324771 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ptet04131]     122324771 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptet00536]     122324771 (thbs1b) Membrane trafficking [BR:ptet04131]  Endocytosis   Phagocytosis    Opsonins     122324771 (thbs1b) Glycosaminoglycan binding proteins [BR:ptet00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122324771 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  122324771 NCBI-ProteinID:  XP_043075373 LinkDB All DBs Position 20:complement(15078974..15089573) Genome browser AA seq 1171 aa AA seqDB search MKSTAIFLLLMLWSCESARVAESRDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPVFEIIS NGKANTLDIVFSTENKQQIVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNTAELDA SIQTILTQETSGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNTIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TNEKDMLMNRMGIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSPCPINGGWGPWSPWDACSATCGGGVQNRKRLCNNPIPMYGGKECVGDAKASQ ICNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGINCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGRGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNVDQKDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcaactgcaatctttttgctactgatgctttggagctgcgagagcgcgagagtc gcagaaagcagagacgacaacagcgtttacgatctgttcgagctcgtccaagtaccgagg aaaaaccacggggtgactctggtgaaaggcgacgatccgtacagccccgcctacaaaatc ctgaaccccgacctgatccccccggttcccgagagcgccttcagggacctgatcgattcc atccacgcggagagaggatttctgcttctgctcaacttcaagcagttcaagcacacgaga ggaagccttctgaccgtggagaagaaagatggctccggacccgtcttcgaaatcatttcc aacgggaaagccaatactctggacatcgttttttccaccgaaaataagcaacagatcgtg tccatcgaggaagccgatttggccgtgggacactggaaaaacatcacgcttttcgtgcag gaagacagggttcagttctatgtgggatgcgaggaggtgaacacggcggagctcgatgct tccatccagactatcctcactcaggagacctcaggtgtggcgagtctgaggatcggaaag ggcgcagtgaaggacaggttcatgggggtgttgcaaaatgtgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgccaaaacacaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggaactgaaaggtcttggtgtggtggtgcaagagctgtccaatgaactccgcaaagtg acaaatgagaaagacatgcttatgaatcgtatgggaattcacgctggcgtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagtggacgattgtacagagtgcact tgccagaactctgcaacggtatgtcgcaagatttcatgccccctaatcccatgtgcaaac gccacagtgcctgatggggagtgctgccctcgatgtggaacaccgagcgactccgccgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgcgaccgcatcaataacaactgcgagggcacgtcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcagctggagt cactggtcaccctggtcttcctgctcggtcacctgtggtgctggcgttatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgt caaactgagaggtgtgagaaatcaccatgtccgatcaatggaggctggggaccgtggtcg ccctgggatgcgtgctcagccacctgtggcggtggagtccaaaaccgtaaacgtctttgc aataatccaatacccatgtatggtggcaaagaatgtgtgggagacgcaaaggccagccag atttgcaacaaacaagcctgtccaatcgacggatgcctttcaaatccgtgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccctacaggatac accggcaatggaatcaactgcaaggatatcaatgagtgtaaggaagtccctgatgcctgt tttgaatttaatggagtccacaggtgtgagaacacagtaccaggctacaactgcctgcct tgcccctcacgctacaccggcccacagccatttggtcgaggagtggaggatgctgcttcc aagaaacaggtgtgcactcctcgcaatccctgcctcgatggaagccacgactgcaataag aatgctcgctgtaactacctcggccatttctcagaccctatgtaccgctgtgagtgcaaa cctggctttgcaggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatctagtgtgtgtcgaaaatgcaacctatcactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggagtcggtgatgcttgtgat aatgatgatgacgatgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtacgactatgatcgtgatgacgtgggagaccgctgcgataactgtccatac aacagcaacccagaccagaccgacacagacaacaatggtgaaggtgacgcctgtgccgtg gacattgatggagacggtattttgaatgaaaatgacaactgcccatatctgtacaacgtc gaccagaaagacaccgatctggacggagttggagaccagtgtgacaactgccctctggaa cacaacccagaccagctcgactcagattctgaccgcgtcggagacaaatgtgacagcaac caggatattgatgaggacggtcaccaaaacaacctggacaactgcccatatattcccaat gctaaccaggctgatcacgacaaggatggtaaaggagatgcttgcgactacgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgacttcgaccaagacaatgtc ctggatatttatgatgtctgtcctgagaactttgacatcagtgaaacagacttccgcaaa ttccagatggttcctctggatcccaagggcacttcccagattgaccccaactgggtggtt cgtcaccaaggaaaagaacttgttcagacagtcaactgcgaccctggcattgctgttggt tttgatgagttcaattcagttgacttcagtggaactttcttcatcaacactgagagggat gatgactatgccggcttcgttttcggataccagtccagctctcgcttctatgtggtcatg tggaagcagatcacacagacctactggtccagcacacctactaaggcacagggttactca gggctgtcaatcaaagtggttaactccaccacagggccaggcgaacatctgaggaacgcc ctgtggcacaccggagacactccaggacaggtgcgcactctgtggcacgacccaaaaaat gtgggatggaaagacttcactgcttacagatggcatttgactcatagaccaagaactgga cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacatacgcaggtggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

DBGET integrated database retrieval system