Puntigrus tetrazona (Sumatra barb): 122324891
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Entry
122324891 CDS
T08985
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ptet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122324891 (dse)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122324891 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
122324891
NCBI-ProteinID:
XP_043075561
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All DBs
Position
20:2431302..2451320
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AA seq
951 aa
AA seq
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MRTYTRGAPTVFFISALWILVSPALAKVDPSGGIPFLGGNYEGTHPMLYFDRTEVEELQR
AAVGTHKALARQIREAGEAILERPEEYLPPWSPAEFSARWNEVYGNNLGLLSMFCLLYPH
RAGALEVAKEYMERMAVQPNWMVKDAPWDEVPIAHSLVGFATAYDFLYEYLSKVQQERFL
QVIGNASRYMYEKSYHRGWGFQYLHNHQPTNCVALLTGSLVVMNQGYLQEAYLWTKQALA
IMEKSMVLLQDVADGSLYEGVAYGTYTTRSLFQYMFLVQRHFDIGHFNHPWLHKHFAFLY
RTVLPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEIIRQNRVLEGPGQA
GKGQRWCTLHTEFLWYDASLQPTPPPDYGASHLHYFEDWGVVTYGSALPAGRNHTFLSFK
SGKLGGRAIFDMVHQNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYT
SLNNAIMFGPAVSESCFAPWEGQVTEACNSKWLKYKHGQAADCQGQVEAALERQGMVFIR
GEGRGAYSPELKIKSFQRNLLLLHPQLLLMVDSIQLHLGSVTHSMSAFFHNTDMPFQETQ
VDGVHGALIRHRNETSKMFWLDDTGSSEKATVGYRSYPRGYPYNGSNYVNVTMSLRYPSS
RVAYIFFGSGVDVQSFSVHGDSETLDIYLATGDHTYTICLYTDALPTKPMAMVLMDQKKV
VFERTAGTNEQPLEEVEEYVNVVEDNLQHVKPVFQQLERHILSRVLNTDRFHKTAERLLK
SSDKRKAPGTVEKMFSLSKKQGKGKGGKKASLSDSLQDIFAQIEAREKKERQRTIKRVYE
EAPEEADGDSRAFIDYNDLRKGRKVGFVKGRKFKEVRVGATAESDDMFNATSYIRLFLVL
NIATFFALLAVLLTRFQRAQSLHTQRCLYCVLLIDSFILLCLYSSCSQAQC
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttacacccgtggggcaccgacagtgttctttataagtgcactgtggattcta
gtgtccccggctctggctaaagtggaccccagtggaggcattccgtttcttggaggcaac
tacgagggaactcaccccatgctgtactttgaccggacagaggttgaggagctgcagcga
gcggcggtggggacacacaaggctttggcccgacagatccgagaggccggggaggccata
ctggagcgacccgaggagtatctgcccccttggagccctgctgagtttagtgcccgctgg
aatgaagtctatgggaacaacttaggcctgctctctatgttctgcctgctgtacccgcac
cgcgcaggtgcactggaagtagccaaggaatacatggagcgcatggctgtgcagcctaac
tggatggtgaaagatgctccgtgggatgaggttccaatagctcactctctggtgggcttt
gctacagcgtatgacttcctgtatgaatacctcagtaaagttcagcaggagcgcttcctg
caggtgattgggaatgcttcacgatacatgtatgagaaatcttaccaccgtggctgggga
ttccagtacctccacaaccaccagcccaccaactgtgtcgctcttctgactggcagcctc
gtggtcatgaaccaaggatacctccaggaagcttacctctggacaaaacaggctcttgcc
atcatggaaaagtccatggtgcttctccaagatgtggctgatgggtctctgtacgagggt
gtggcgtatgggacttacaccactcgttctctctttcagtacatgtttttggtacagaga
cactttgacattggccacttcaatcacccctggctgcacaaacatttcgcatttctctac
aggacagtgttgcctggttttcagagaacggttgcaatcgcagattccaactataactgg
ttctatgggccagagagtcagttggtgtttttggatcggtatgtcatgagaaatggcagc
gggaactggctggctgagatcatcagacagaatcgggttctggagggcccgggacaggcc
ggcaagggtcagcgctggtgcacgctgcacacagagttcctctggtatgatgccagcctg
cagcccaccccacctcctgattatggtgcatcacacctccattatttcgaagactgggga
gtggtgacctacggaagcgccctgcctgctgggagaaaccacacatttctgtccttcaag
tcgggcaagctcgggggacgtgccattttcgacatggttcaccaaaacaaatacaaagac
tggatcaaagggtggcggaactttaatgcaggccatgagcatccggaccagaattccttt
acctttgctccgaacggagtcccgtttatcacagaggcattgtacggtcccaaatacacc
tctctcaacaatgccatcatgttcgggcccgccgtgtcggagagctgctttgcaccatgg
gaaggccaagttactgaggcttgtaactctaaatggcttaagtacaagcacggtcaagcg
gcagactgccaggggcaggtggaggcagctctggagcggcagggcatggtgtttattcgc
ggggaaggtcgcggcgcttacagccctgagctgaagatcaagagttttcaaaggaactta
ctgttgcttcatcctcagctgctgctgatggttgacagcatacagctgcatttaggcagt
gtgacacacagcatgagtgccttcttccacaacacagacatgccctttcaggaaacccaa
gtcgatggagttcatggtgctctcatcagacaccgaaacgaaacctccaagatgttctgg
ttggacgatacgggtagcagtgaaaaggcaacagtgggatataggagctacccccgtgga
tacccctataatggttcaaattacgtaaacgtgactatgtcactgaggtaccccagcagc
agagtggcctacatcttcttcggatctggagtggatgttcagagtttcagcgtgcacgga
gactcagaaacactggacatctatctggccaccggagatcacacctacaccatctgtctc
tacacagatgcgcttcccaccaagcctatggccatggtgttgatggaccaaaagaaagta
gtgtttgaaaggacagcagggacaaatgagcagccgttggaggaggtcgaggaatacgtt
aatgttgtggaggacaatctgcagcatgtcaaaccagtcttccagcagctggagaggcat
atcctttcgcgggtgcttaacacggaccgtttccacaaaactgcggagcgcctcctgaag
tcctccgacaagaggaaggccccagggactgtggagaagatgttttccctttctaagaag
caagggaaggggaagggaggaaagaaggccagcctttctgacagcctccaagacatcttc
gctcaaatcgaggccagggagaagaaggagaggcagaggacgattaagcgcgtctatgag
gaggctcccgaggaggcagacggagactcgagggcgttcatcgactacaacgatctacga
aagggcaggaaagtgggatttgtcaagggccggaaattcaaagaagtacgtgtgggggct
acggcagagagcgacgatatgtttaatgccacctcgtacattcgcctcttcctagtttta
aatatagccactttcttcgccctgctggcagtgctgttaacacgcttccagcgggcgcag
agtttgcacacgcagcgctgcctttactgcgtcctcctcatagacagcttcatcctgctc
tgtctctattcctcctgctctcaggcacagtgctga
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