Puntigrus tetrazona (Sumatra barb): 122326828
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Entry
122326828 CDS
T08985
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122326828
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122326828
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122326828
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122326828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
PKD_channel
Ank_4
Ank_5
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
122326828
NCBI-ProteinID:
XP_043077936
LinkDB
All DBs
Position
21:complement(14491129..14522022)
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AA seq
1021 aa
AA seq
DB search
MNPMAQLYYNKARNSPYRDRIPLQIVRAEVELSAKERAYLTAVEKGDYAGVKQALEEAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLSHGVHMGDALLYSIRKEVVGAVELLLS
YKKPSGEKQVPSHMMDTQFSEFTPDITPIMLAAHTNNYEIIKQLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSCELETILNHRDDHSEELDPHECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSTLG
TFIKKPFIKFICHTASYLTFLFLLLLASQHIVQTDLHVQGPPPTIVEWMILPWVLGFIWA
EIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPRVEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKASEEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIVPSPKSVWHLCVWLHCRLCGHGEPRHEEECKHENLKEFTERHADNLIQNQHYQE
VIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSS
EATQQDEVAEPEEEEDSESDGLGELRCGDGGESSRSKASTSFSQCYRRNRESQFSVSALF
KSMSGPAREHPESNGLRNNIPHSSAFVRTSSRLQRFSRSKKNSLHRLGMLMSRMNGHIPD
QHAETPGDQQPAYSISDQLPQTSWQGPQVLSKVTRSEMHLHTLGTEQDPTQATSQRANGR
DSLILRPPSHSLPPLHCASSLTTSSAQLLASSDDLCHGWMGPCDSLGSSSWEQEESVTTQ
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatggcgcagctgtactacaacaaggcccgtaactccccgtaccgcgatcgc
atcccgctgcagatcgtgagggcggaggttgagctgtctgccaaggaacgagcctacctg
acggcggtggagaagggagactatgccggagttaaacaggctcttgaggaggccgagatc
tattacaacatcaacgtcaattgtctggacccgttgggccgcagcgcgctcctcatcgct
attgagaacgaaaacctggaggtgatggagctgctgttgagtcatggcgtgcacatgggc
gacgcgctcctctactccatccgcaaggaggtggtgggagccgtggagttgctgctatcc
tacaagaagccaagtggagagaaacaggttccttctcacatgatggacacacagttttcg
gagtttacgcccgatatcacaccaatcatgttggctgcccacactaacaactacgagata
atcaagcaattagttcaacgaaaggtcaccatcccgcgaccacaccagatccgctgcgac
tgcgtggagtgtgtatcgagctccgaagtggacagcctgcggcactcccgttcacgtcta
aacatctacaaaactcttgccagcccctctcttatcgccctttccagcgaagaccccatc
ctcactgcgttcagactgggctgggagctgaaggagctcagtaaggtggagaatgagttc
cggcaggagtacgaagagctgtcgcagcagtgcaagctttttgctaaagacttgctggat
caggcccgcagctcctgtgagctggagaccatcctcaaccatcgggatgaccacagtgaa
gaactggacccccatgagtgcagagacctggccaagctcaagctagccatcaaataccac
cagaaagagtttgtagctcagcccaactgccagcagctcctggcaacactgtggtacgac
ggcttcccaggatggagaagacgtcactgggctgtgaagcttgtcacttgcttcatcatt
ggcctgctcttccctgtcttctccctcatataccttctggctccaaagagcaccctggga
accttcatcaagaaacctttcatcaagttcatctgccacactgcctcctacctgaccttc
ctcttcctcctcctcctcgcctcacagcatatcgttcagactgacctgcatgtacaggga
cctccacccactattgtagagtggatgatcttaccctgggttctaggcttcatctgggcc
gagattaaagagatgtgggatggcggtttcacagagtacatccatgactggtggaacctg
atggattttgcaatgaactctctctacctggctactatatctcttaaaatggtggcctac
tttaagtacaacagctctcgtcctcgtgtggagtgggagatgtggcaccctacgcttatc
gccgaggctctattcgcaatcgccaacatcttcagctctctgcgtctcatctctctattc
accgccaactctcacttgggcccactgcagatctctcttggccgcatgctcctggacatc
ctcaagttccttttcatctactgtctggtgctgctggctttcgccaacggccttaaccag
ctctacttctactacgagacgaaggcgtccgaagagcccaaccactgcaaagggatccgc
tgtgagaagcagaataatgccttctctacgctgtttgaaactcttcagtctctcttctgg
tctgtgtttgggctgctgaatctgtacgtcactaacgtgaaggctcgtcatgagttcacc
gagtttgtgggggccaccatgttcggcacttataatgtcatctcactggtggtgctgctg
aacatgctcatcgctatgatgaacaactcttaccaactcattgctgatcacgcagacatc
gagtggaaatttgctcgtaccaagctgtggatgagctactttgatgagggaggcacgtta
ccaccacccttcaacatcgtacccagtccaaagtccgtgtggcacctgtgtgtgtggctg
cactgccgtctgtgtggacatggagagcccagacacgaggaggagtgtaaacacgaaaac
ctcaaagagttcacggaaaggcatgctgataacctcattcagaaccagcactaccaggag
gtgatcagaaacttggtaaagcgatatgttgcagccatgatccgcagtgccaaaacagat
gaagggctgacagaggagaacttcaaggaacttaagcaggacatctccagcttccgctac
gaggttcttgaccttctgggcaaccgtaaaccaccacgacgcacatattcttctagtagc
gaggccactcagcaggacgaagtagctgagcccgaggaagaagaggactcagagagtgat
gggcttggagaactcagatgtggggatggaggagagtcgtccagatccaaagcatctaca
tccttctcccagtgttacaggagaaacagagagtcccagttcagcgtatcggctctcttc
aagtccatgtcgggaccagccagggaacacccggaaagcaatggcttgagaaacaacata
ccccactcgtctgcatttgtgcggaccagcagccgcctgcagcgcttttcgcgctccaag
aaaaactctttgcatcgtttgggaatgctaatgtcacgaatgaatggacatatcccagac
caacatgcagagaccccgggagatcagcaacctgcatacagcatctcagaccaattaccg
caaacatcttggcaaggtccccaggttctgtcaaaggtaactcggagcgagatgcacctg
cacacgctgggaactgaacaggacccaacgcaggccacatctcaacgggcaaacggcagg
gacagtctcatcctccggccgcccagccactcgctgccccctctgcactgtgcttccagc
ctgaccacttccagtgctcagctattggcctccagtgatgatttgtgccatggctggatg
ggaccctgtgacagtttgggctcctccagctgggaacaagaggagtcagttacaacacag
ctgtag
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integrated database retrieval system
