Puntigrus tetrazona (Sumatra barb): 122328185
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Entry
122328185 CDS
T08985
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
ptet04510
Focal adhesion
ptet04540
Gap junction
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122328185
04020 Calcium signaling pathway
122328185
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122328185
04540 Gap junction
122328185
09142 Cell motility
04810 Regulation of actin cytoskeleton
122328185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122328185
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122328185
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
Growth factors (RTK binding)
122328185
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122328185
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
122328185
NCBI-ProteinID:
XP_043079827
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All DBs
Position
22:complement(12560843..12568727)
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AA seq
194 aa
AA seq
DB search
MRAALIHFLFCCFSLLSAAAEEAPIPQELIERLSNSEIRSISDLQRILEIDFLENEVLED
VKRGYHKEHLYDSRHLKNSHSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFLIWP
PCVEVRRCSGCCNTSNMRCHPSKKHHRTVKVAKVEYVRRRPKLREVQVQLEDHLECVCTS
KHHSESRIHTADIR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcgctgatccactttctcttctgctgcttctctctgctttcagcagccgct
gaggaagcgccaattccgcaagagctaattgagagactttctaacagtgagatccgcagc
ataagcgacctccagaggatcctggagattgacttcttagagaatgaggtgctggaggac
gttaaacgaggctaccataaggagcatctgtatgatagcagacacctcaagaactctcac
tccagacgcaagagaagcattgaggaggcagtgcccgccgtctgtaagacgcgcacggtg
atctacgagatcccacgcagtcaggtcgatcccacggccgctaacttcctgatctggcct
ccgtgcgtggaggtgaggcgatgctcgggctgctgcaacaccagcaacatgcgctgccac
ccgtccaaaaaacaccacaggaccgtgaaggtggccaaggtggagtacgtacgcaggagg
ccgaagctccgggaggtgcaggtgcagctggaggatcatctcgagtgcgtctgcacgtcc
aaacatcactcagagtcccgcatacacacggcagatataaggtga
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