Puntigrus tetrazona (Sumatra barb): 122330154
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Entry
122330154 CDS
T08985
Symbol
tnfrsf11a
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122330154 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ptet04050
]
122330154 (tnfrsf11a)
04090 CD molecules [BR:
ptet04090
]
122330154 (tnfrsf11a)
Cytokine receptors [BR:
ptet04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122330154 (tnfrsf11a)
CD molecules [BR:
ptet04090
]
Proteins
122330154 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
KIAA1549
Motif
Other DBs
NCBI-GeneID:
122330154
NCBI-ProteinID:
XP_043082948
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Position
24:complement(16857661..16869655)
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AA seq
576 aa
AA seq
DB search
MRVNFSASWIFQGWITHFVLALYTQTGLAKSCQQNEYRHNGECCRKCEPGKYVFTHCDDG
SSTTCRDCGPEQYQPDWNSEMKCIPQNYCDEGKGFNRTRPHNPVALEPCRCKQGFHCSQI
NCEYCEAIKKCPAGEGVELDGMGRASCSSCQPGYFSDTLSTEACKKWTDCKAIGKTEKQP
GTSKSDVICGVNSPVMTPWVVVAILSVIIVVSLVVLFLFCCKDKLNFLSVNLRTCVQNLK
GSRNQQETLTSYHGGNGPQTLPLICQERTPPESLITCPSTQLTILDETSTCTDQEQDQDR
DETSSGSSSEDSGGSSASPLSGSSCSCALSMKEPIEVGENEDCSQLVATGSATCSSCRPG
DAIGENAQVVGLKEPLLCESCSSDVLLDLQCSQELNLDYSSPAGKEAMSEMRGVQGDRGP
VEGLHRQNEPCCCSIDSTTVPPLSSVSANDQGLSLIHSDDHKLSDPDADFQNQCSESALT
SGQVTGNNNTTFISSGQVMNFSXEVIVVYVSQTSLGSGGGTDEPFSCPVQEESNEDSFQS
EPKSNITTTPQAKSRNGHLEKHLPVQEMTNDWSWQK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaatttttcagctagttggatatttcaaggatggatcacacacttcgttctc
gctctgtacacgcagacaggactggccaaaagctgccaacaaaatgaatataggcacaac
ggggaatgttgcagaaaatgtgaaccagggaaatacgttttcacccattgcgatgacggt
tcgagcacaacgtgccgtgattgtggccctgaacagtaccagccagactggaacagtgaa
atgaaatgtattcctcagaattactgcgatgaaggtaaaggatttaacagaactcgtcct
cacaaccctgtagcgctcgaaccgtgtcggtgcaagcagggtttccactgctctcagatc
aactgtgaatactgtgaggctatcaaaaaatgtcctgcaggagaaggagtcgaattggac
gggatgggtagagcttcttgttcgtcttgtcagcctggatatttctcagataccctgtca
acagaagcctgcaagaaatggacagattgtaaagctatcggcaagaccgagaagcagcca
ggaacctctaaatcagacgtgatctgtggagtcaattctcctgttatgacaccctgggtg
gtggttgccatcctctcggttatcatcgtggtatcactggttgttctcttcttgttttgc
tgcaaggataagctgaacttcctctcagtaaatctacgcacctgcgtccaaaacctgaaa
ggaagtagaaaccaacaggaaactctgacttcataccacggtggtaacggtccacaaacc
ctccctctgatttgccaagaacgaacccccccagagtccctgatcacgtgtcccagcacc
cagttaaccattctcgatgaaacgtcgacttgcacggaccaagaacaagaccaggaccga
gacgaaacctcgtcgggcagctccagcgaggactccggcggtagctctgcgtctcctctg
tccgggagctcctgcagctgtgcgctttccatgaaggagcccatcgaggtcggagagaat
gaggactgcagtcagctggtggccacgggttcggccacatgcagctcctgcaggccggga
gacgccatcggagaaaacgcgcaggtcgtcggcctgaaagagcctctgctgtgtgagagc
tgctcgtcggacgtcctgctggatctgcagtgctcccaggaactcaatctggactacagc
agccctgcgggaaaagaagccatgtcagagatgagaggcgtccaaggggacagaggtccg
gtggaaggcctgcacagacagaacgaaccttgctgctgcagcatagactccaccaccgtt
cctcctctctcgtcggtcagcgctaatgaccagggcctttcgctgatccacagcgatgac
cacaagctgtctgaccccgacgccgacttccagaaccaatgctcagaatcggctctcaca
tctggtcaggtgacaggaaacaacaacactacttttatctccagcgggcaggtgatgaac
ttcagcngggaagtcatcgtggtgtacgtcagtcaaacgtcgctgggaagcggcggagga
acagatgaacccttcagctgcccggttcaggaagaatccaacgaagacagttttcaaagc
gagccaaagtctaacataaccacgacaccgcaggccaagagcaggaacggacacctggag
aaacacctgcccgtgcaggaaatgaccaacgactggtcctggcagaaataa
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