Puntigrus tetrazona (Sumatra barb): 122333970
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Entry
122333970 CDS
T08985
Symbol
si:ch73-31d8.2
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain
KO
K06752
MHC class II antigen
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04514
Cell adhesion molecules
ptet04672
Intestinal immune network for IgA production
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122333970 (si:ch73-31d8.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122333970 (si:ch73-31d8.2)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122333970 (si:ch73-31d8.2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122333970 (si:ch73-31d8.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122333970 (si:ch73-31d8.2)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122333970 (si:ch73-31d8.2)
Exosomal proteins of epithelial cells
122333970 (si:ch73-31d8.2)
Exosomal proteins of breast milk
122333970 (si:ch73-31d8.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
MHC_II_alpha
Ig_2
C2-set_2
ig
I-set
Podoplanin
Motif
Other DBs
NCBI-GeneID:
122333970
NCBI-ProteinID:
XP_043087765
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MPRSWHSAVALEMLHLLFLFCSLDIFWGFSRAQGVKHLMRQLTYCHIEMMDAGFELEFDG
EELWHVDPIDYTAKQRLPEFVDDWTLDRNLPSLAHYSIGTCFYNIPRCITGEKNPPESIV
PPSTQLYAKSDVKLGVENTLICSVSDFHPPPVNISWTRNGEPVKEQDVSETQYYSNPDFS
FRLFSYLSFRPERGDVYTCSVRHRGLERDITRFWEVEVPEDSQEVETAVLVIGILVGFLG
FVVGIIIIVMSKMELRAV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtcgtggcattcagctgttgcccttgaaatgttgcacttgctctttctgttt
tgcagcttagacattttctggggtttttcaagagctcaaggtgttaagcatttaatgcgt
cagctgacgtactgtcacatagagatgatggacgctggttttgagctggagtttgatggt
gaggagctctggcatgtcgaccctatagattacacagcaaagcagcgtctgcccgagttc
gtcgacgactggaccctcgaccgcaatctgccttctctagcgcattactccatcggcacc
tgcttctacaatattcctcgctgcatcacaggagaaaaaaatccccccgaatccatcgtt
cctccgtccacgcagctgtacgccaagagcgacgtgaagctcggcgtcgaaaacactctc
atctgctcggtgagcgacttccacccgccgccggtcaacatctcgtggacgaggaacgga
gagccggtgaaggagcaggacgtcagcgagacgcagtactactccaacccggacttcagc
tttcgtcttttctcttacctgagcttccgtcccgagcggggggacgtctacacctgcagc
gtgagacaccgaggactggagcgggacatcaccaggttctgggaggtggaggtgccggaa
gactctcaggaggttgagacagccgtgcttgtgatcggaattcttgtgggatttttggga
tttgtggtgggaatcattataatcgtaatgagcaagatggagctgcgcgctgtatga
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