Puntigrus tetrazona (Sumatra barb): 122334470 Help Entry 122334470         CDS       T08985                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism ptet  Puntigrus tetrazona (Sumatra barb) Pathway ptet04115   p53 signaling pathway ptet04145   Phagosome ptet04148   Efferocytosis ptet04350   TGF-beta signaling pathway ptet04510   Focal adhesion ptet04512   ECM-receptor interaction ptet04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ptet00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     122334470   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122334470  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     122334470    04148 Efferocytosis     122334470   09143 Cell growth and death    04115 p53 signaling pathway     122334470   09144 Cellular community - eukaryotes    04510 Focal adhesion     122334470   09142 Cell motility    04820 Cytoskeleton in muscle cells     122334470  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ptet04131]     122334470   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptet00536]     122334470 Membrane trafficking [BR:ptet04131]  Endocytosis   Phagocytosis    Opsonins     122334470 Glycosaminoglycan binding proteins [BR:ptet00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122334470 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  122334470 NCBI-ProteinID:  XP_043088359 LinkDB All DBs Position Unknown AA seq 1174 aa AA seqDB search MILRGLVVCLLLWSPASSRRIEMPDDDTVFDLFELTHVHKKHHGVSLVKGPDPNSPAYKI LNPNLIPSVPELSFRDLIYSIQSERGFIFTANLKQAKRTRGSLVSVERADGTGSVFEIIS NGKANTVDLVYWTASGQHVVSIEDVDVANGHWKNITVFVQEDRAQVHVGCEEINTQELDA PIQQILNQESADIASLRIAKGAAKTDRFMGVLQNVRFVFGTTLDAILRNKGCESSAFITD VMTLENPVNGSSPAIRTDYTGHKSKDLQDICGFSCDDLSSMFKELKGLGMVVKQLSNELR QVTADNNLIMTQIKIHEGVCLHNGIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPC ANATVPDGECCPRCGTPNDAGVDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCDGTS VQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGD GRQTEPCQKDPCPVNGGWGPWSPWDSCSVTCGGGLQRRHRLCNSPAPKYGGKECMGDSKA TRLCNAQSCPVDGCLSNPCFEGAKCTSFPDGSWKCGECPVGYTGNGVHCQDIDECKEVPD ACFVLNGVHQCVNTEPGYNCLPCPPRYSGQQPFGRGKEQAIANKQVCTPRNPCEDGSHDC NKNANCIYLGIFSDIMYRCECKPGYAGNGYICGGDSDLDGWPNTDLHCVENATYHCKKDN CPDLPNSGQEDYDKDGIGDACDNDDDNDGIPDDGDNCPFTFNPRQYDHDRDQVGDRCDNC PYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDSDRDGVGDHCDNCP LEHNPDQIDSDSDNIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDHD DDNDGIPDEKDNCRLAFNPDQLDSDGDGRGDICKDDFDVDNIPDIYDVCPENFGISETDF RRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTD RDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLR NALWHTGDTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGHIRVIMYEGKKVLADSGS IYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDAS NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgattctgagaggactcgtcgtgtgtctcttgttgtggagtccggccagcagcagacgc atagaaatgccggacgatgacaccgtgtttgacctgttcgagctcactcatgtccacaag aagcaccacggcgtgagtttagtgaagggacccgacccaaacagccccgcgtacaagatc ctgaacccgaacctgatcccctcagtgcccgagctctccttcagggacctgatctactcc atccagagcgagagaggcttcatcttcaccgccaacctcaagcaagccaagcgcaccagg ggcagcctggtctccgtggagagggcagacggcaccggatccgtcttcgagatcatctcc aacgggaaagccaacaccgtggacctggtgtactggaccgcgagcggacagcacgtggtg tccatcgaggacgtggacgtggcgaacggacactggaagaacatcacggtgtttgtgcag gaggatcgagctcaagttcatgtgggctgcgaggagatcaacactcaagaactcgacgct ccgatccagcagatcctgaatcaggagagcgcggacatcgcgagtctgaggatcgccaag ggagccgccaaaaccgaccgcttcatgggagttctccagaacgtgcggtttgtttttgga acaacgctggacgcgattttacgcaataaaggatgcgagagctcagccttcatcactgat gtcatgaccttggaaaaccccgtgaacggatccagcccggccatccgcactgattacacc ggacacaagtctaaagatctgcaggacatctgcggtttctcctgcgacgatctgtccagc atgtttaaggagctcaagggactcggcatggtggtgaagcagttgtctaacgagctccgc caagtgacagcagacaacaacttaatcatgactcagattaaaatccacgaaggggtctgt ctgcacaacggcatcgtttacagggacaaggacgagtggacggtggacagctgcacacac tgcacttgtcagaactccgccactgtgtgccgcgaaatctcctgtcctctcatgccttgc gccaacgccaccgtccccgacggcgaatgctgcccgcgctgcggaacaccgaatgacgcg ggtgttgatggctggtccccctggtctgaatggacgcactgttcggtgagctgcggcaga ggtattcagcagcgtggacgctcctgcgaccgaatcaacagcaactgtgacggcacgtct gtccagacgagagattgttacacgcaagaatgcgacaaacgcttcaagcaggacggcggc tggagccattggtccccctggtcttcttgctcggtgacgtgtggagaaggggtcatcact cgcatccggttgtgcaactcccctacgcctcagatgggcgggaaagactgcgagggagac ggtcgtcagactgaaccatgccagaaggacccgtgcccagtgaatggaggttggggaccc tggtcaccctgggattcttgctccgtcacgtgcggtggaggactgcagcgcaggcaccga ctctgtaacagccctgctcccaaatacggtggaaaggaatgtatgggcgactccaaagcc acccgtttgtgcaacgcccagtcgtgtccagttgatggatgcctgtctaacccgtgcttc gagggcgccaaatgcaccagcttccccgatggctcctggaagtgtggagagtgtccggtt ggatacaccgggaatggagtccactgtcaagacattgatgagtgcaaagaagttcctgat gcctgtttcgtgctcaatggagtccatcagtgtgtgaacacagagccaggctacaactgc ctgccctgccctccacgctactctggacagcagcccttcggcaggggaaaggagcaggcc atcgccaacaaacaggtctgcacacctagaaacccttgcgaggacggtagccatgactgc aacaagaatgccaactgcatctacctgggcatcttctccgacatcatgtaccgctgcgaa tgtaaaccaggctatgctgggaacggttatatatgtggaggggactctgaccttgacggc tggccaaacacagacctccactgtgtggaaaacgctacctaccactgcaagaaggacaac tgccctgaccttcccaactctggtcaagaagactatgacaaagatggaattggagatgct tgtgacaatgatgatgacaatgatgggatccctgatgatggggataattgcccgttcacc tttaacccaagacagtacgaccacgaccgcgatcaagttggtgatcgctgtgataattgt ccatacgacagtaatccagaacagactgacaccgacaacaacggggagggtgatgcatgt gccatcgacatcgatggtgatggcatcctgaatgagaaggacaactgtccatatgtgtac aacactgaccaaagagacagcgaccgagacggagtgggtgaccactgtgacaactgccca ctggagcacaaccctgaccagatcgactctgactcagacaacattggagacaagtgtgac aacaaccaggacatcgacgaggatggccatcagaacaaccttgacaactgtccctacatc cccaacgccaaccaggtcgaccacgacaaggatggtaaaggagatgcctgcgatcacgac gatgacaatgatggtattcctgatgaaaaagacaactgccggctcgccttcaaccctgat caactggattcagacggagatgggcgaggtgacatttgcaaggatgactttgatgtcgat aacatcccggatatttacgacgtttgcccagaaaactttggcatcagtgaaaccgatttc cgcaggttccaaatggtccctctcgatcccacgggaacttctcaaatcgaccccaactgg gtcgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcattgct gttggttatgatgagttcaatgctgttgactttagtggcacgttcttcatcaacacagac cgtgacgatgactatgccggctttgtgtttggttaccaatccagttcacgtttctatgtg gtgatgtggaaacagatcacacagacctactggtctcatacacctactaaagcacagggt tactctggactgtccattaaagtagtgaactcgaccacaggaccaggtgaacacctcagg aacgctctgtggcatactggagacacagagggacaagtgcgtaccttgtggcatgatccc aagaacattggctggaaggattacaccgcctacagatggcacctgatccacagacccaaa agtggacacatcagagtcattatgtatgaaggcaagaaagtcttggctgattcaggaagc atctatgacaagacatatgctggagggagacttggtctctttgtcttctctcaagagatg gtttacttctcagacctcaaatacgaatgccgagatgcatcttaa

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