Puntigrus tetrazona (Sumatra barb): 122341672
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Entry
122341672 CDS
T08985
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03272
Virion - Hepatitis viruses
ptet04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122341672 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122341672 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122341672 (ldlra)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122341672 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF_3
CcmH
Motif
Other DBs
NCBI-GeneID:
122341672
NCBI-ProteinID:
XP_043091122
LinkDB
All DBs
Position
3:complement(24634162..24651308)
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AA seq
856 aa
AA seq
DB search
MKRSFIFLLAVTFFCPVQAGVLTCEPRQYQCGNGKCITSRWVCDDTDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENGADEEGCDPRRCLDGEFRCGSGQCVS
AAFVCDDERDCDDGSDEVSCPPTTCGSGSFRCDNAQCVPRLWVCDGDADCADGTDELPQK
CITGTPKPTKNPCSSMEFHCGSGECIHSSWKCDGGEDCLDRSDEKNCSLPTCRPDEFQCG
DGSCIHGSRQCNHVYDCKDLSDELGCVNATHCEPPHRFKCRSGECISMEKVCNKQRDCRD
WSDEPLRECDSNECLYYNGGCSHICNDLKIGYECLCPTGFQLVEKRRCEDIDECSNPDTC
SQICINLMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYARVIP
RLKNVVALDMNVASREIYWSDLSLKKIYRAPMDTADNSSQHSVVIGSDLDAPEGIAVDWI
HGNIYWTDSIKGAISVATADGNRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIER
GGLNGGDRYALVTDDIVWPNGITLDLLNQRLYWVDSKLHTLSSIGVQGDGRRTLIIDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGRDITKVAEHLSSPEDIVLYHNLKQPTGM
NWCRVNNGGCEFLCLAAPQINRFSPKYTCACPDNMMLARDMRKCVQAVVTTEPPVKTEIV
TTSHPKVPLKTTLNPAPAIPNRPTQATPVKPSQTTTKLPLSTPTDDHHSTVKAVFPSSSP
TTLTLYIIPPLAILCLIVGGAVLFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRNGSSD
GYFYPQRQVVSIDDEI
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcattcatatttttactggcagtaactttcttctgtcctgttcaagcaggt
gttttgacttgtgaaccacggcagtatcagtgtggcaatggaaagtgtatcacgtcgaga
tgggtgtgtgatgacactgatgactgtggagacggcaccgatgagcttcccgctgcctgc
ttggccaagacctgcagacctagtgagttcagctgtggtgggcgactgaaccagtgtgtg
ccaaaaagctggaagtgtgatggcaaagcagactgcgagaacggcgcggatgaggaaggc
tgcgatcctcggcggtgcctggacggcgagtttcgctgcggcagcggccagtgtgtgagt
gccgcgtttgtgtgtgacgatgagagagactgcgacgacggaagtgatgaagtctcctgt
ccgcccaccacgtgcggctccggctccttcaggtgcgacaacgctcagtgcgtgcctcga
ctgtgggtctgtgatggagacgccgactgcgccgatggcactgacgaattacctcagaaa
tgcatcacagggacgcctaaacctaccaaaaacccctgctcctctatggaattccactgt
ggcagtggggagtgcatacacagcagctggaaatgcgacgggggagaagactgtttggat
cgctccgatgagaaaaactgctccttgcccacatgcagaccggatgagttccaatgtggt
gacggatcttgcatccatggcagccggcagtgcaaccacgtatatgactgcaaagatttg
agcgatgagctgggctgtgttaatgcaacccattgtgagccaccacacaggtttaagtgc
cgcagcggtgaatgcatcagcatggaaaaagtttgcaacaagcaacgggactgtcgggat
tggtccgacgaaccgttacgagaatgtgattccaatgagtgtctttattacaacgggggt
tgttctcatatatgtaatgacctaaagattggttacgagtgcctctgtcccactggcttc
cagttagtggaaaagagacgctgtgaagacattgatgagtgctccaatccagacacctgc
agccaaatctgcatcaacctgatgggtagttacaagtgtgagtgcgaggatggctaccag
atggacccagccagcaaagcttgcaaagctattggaaccatcgcctacctatttttcacc
aatcgccatgaggtcaggaagatgactctggatcgtagcgagtacgcacgtgttattccc
cgcctgaagaacgttgtggcactggatatgaacgttgcttcaagggagatctactggtcc
gatttatctctcaaaaagatatacagagcaccaatggatacagcagataactcctctcaa
catagtgttgtgattgggagtgacttagatgcacctgagggtattgctgtcgactggatc
cacgggaacatctactggacagacagcattaaaggtgccatctctgtggcgacggcggat
ggaaacagacgaaagactctcttcaaagaaaacctggccaagccacgtgctattgtggtc
gaccctattaagaacttcatgttctggactgactggggcacaccagctaagatcgagaga
ggtggtcttaatggaggggaccgttatgccctagttacggatgacattgtctggcccaat
ggaataactcttgaccttttgaaccagcgtttgtactgggtcgactccaagctacacact
ctctccagcatcggcgtgcagggagatggtcggcgtactctgatcattgaccagggcaaa
cttgcccaccctctggggctcactgtttttgaggagaaagtgttttggacagatgtaagc
aataatgcaattctaagtgcaaatcgtgttactggaagagacatcacgaaagtggccgaa
cacctctcgtccccagaggacatcgtcttgtatcacaacctcaagcaaccgactggaatg
aactggtgcagggtcaacaatggtggctgtgaattcctttgcctggctgcccctcaaatc
aatagattctcacccaaatacacttgtgcctgcccagacaacatgatgttggccagagac
atgcgaaaatgtgttcaagctgtagtcacaacagaacctcctgtcaagactgaaatagtt
acaactagtcatcctaaagtaccgttgaagacaacgttaaatcctgctcctgcgatccct
aaccgacccactcaagctactccagtcaagccatcccaaaccacaaccaaacttccttta
tctaccccgacagatgaccaccacagtactgtcaaagctgtgtttccgtcatcgtcgccc
acaacgttgaccttgtacattatacctcctcttgcgatcctgtgtttgattgtgggtggt
gctgtgctgttctggagaaagtggcgtcagaaaaataccaacagcattcactttgacaac
ccagtttatcaaaagaccacagaggaccaggtgcatctatgcagaaacggtagttctgat
ggctatttttacccacagagacaggttgttagcatcgatgatgaaatatga
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