Puntigrus tetrazona (Sumatra barb): 122341906
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Entry
122341906 CDS
T08985
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
ptet04510
Focal adhesion
ptet04540
Gap junction
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122341906 (pdgfbb)
04020 Calcium signaling pathway
122341906 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122341906 (pdgfbb)
04540 Gap junction
122341906 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122341906 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122341906 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122341906 (pdgfbb)
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
Growth factors (RTK binding)
122341906 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122341906 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
122341906
NCBI-ProteinID:
XP_043091534
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All DBs
Position
3:23221703..23232300
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AA seq
480 aa
AA seq
DB search
MMRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEP
NGHHDNDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRC
SGCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRR
KSAGNKQEGRERSGKPRPKDELHRRDELKHNQRLSLEDLFGHSWLPKESFSEPGFGRDGW
ALNETQYGGGKGHHRHPGDGRRHGKTNDTVPLPNHTEQEETDLSSRNVTRFESLSSANQS
ITNQTSDLTMTTLDLTNQTAMHRSNLTQGNQTDQPASNATGTADQNRGDVFLSVEESGQK
LRGQTTDVEVKEEEREQRQMDKKTKEEETEELLLMHKNMDEEKHKHHLKVQHKNIQPDEK
LQQLHHKQLTHTTTQRTGTTSAPAQRLPPHKPPRPPPHPPKRRRKQRNRISKSAMRALLM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatcgcggatcccgctccttctcgcggtacttgcggcggcgtgtctgcggttt
ggcagtgcggaggctgatcctctcccggccgctgtggttgagttggtgaagggtggatct
gtgtcttctattcaagatctgcagtttttgctgttctccgaatctatagaggttgagccg
aacggtcaccatgacaacgacaccagcaaccgtctgccacgcagccttctggacgctcag
ccggctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatg
ttggaccgtagcaatgcaaatttcctgctgtggcctccgtgtgtggaggtgcagaggtgc
tcgggctgctgtaacaccaagagcctgcagtgtgtgcctgtactcacacacacacgatac
ctgcaggtgatgaagatacagtatgtgaacaaacggccgctttacgataaggcggtagtc
tctgttctcgaccacgtggagtgtcgctgtcagccggctcctcggcccgctcagcgccgg
aaatcagccggcaacaaacaagagggacgggagcgctctgggaaacctcgacccaaagat
gagctccatcgcagggacgaactcaaacacaaccagaggttaagtctggaggaccttttc
ggccacagctggctgcccaaagagagcttctccgagccaggattcggccgggacggctgg
gctctgaacgagacgcagtacggagggggcaaaggtcatcaccgtcaccctggggacgga
aggagacacggcaaaacaaatgacacagttccactgccgaatcacaccgagcaggaagaa
actgacttgtcatcgcgcaacgttacgcgattcgaatcgctgagtagcgctaaccaaagc
ataaccaatcagacttctgatcttaccatgactacactggatttgaccaatcagactgca
atgcaccggtcaaatctaacgcaaggaaatcagacagaccaacccgcctctaacgccaca
gggacagccgatcagaatcgaggagatgtgtttctgtctgtagaggagagcggtcagaag
ctgagaggtcagactacggacgtggaggtgaaggaggaggagcgagagcagagacaaatg
gacaaaaagaccaaggaggaggaaacggaagagctgctgctaatgcacaaaaacatggat
gaagaaaaacacaaacatcacctcaaagtacagcacaagaatatacagccggacgagaaa
ctacagcagctccatcacaaacaactcactcatacaacaacacagaggacaggaactaca
tctgctcccgcgcaacgcctccctccccacaaaccccccagaccacctcctcaccccccg
aaacggaggagaaagcagcgcaatcgcatcagcaaatcagccatgagagccctgctcatg
taa
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