KEGG   Puntigrus tetrazona (Sumatra barb): 122342532
Entry
122342532         CDS       T08985                                 
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform X1
  KO
K04687  interferon gamma
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03050  Proteasome
ptet04060  Cytokine-cytokine receptor interaction
ptet04217  Necroptosis
ptet04350  TGF-beta signaling pathway
ptet05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    122342532 (ifng1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    122342532 (ifng1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    122342532 (ifng1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    122342532 (ifng1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122342532 (ifng1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ptet03051]
    122342532 (ifng1)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ptet04052]
    122342532 (ifng1)
   00536 Glycosaminoglycan binding proteins [BR:ptet00536]
    122342532 (ifng1)
Proteasome [BR:ptet03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    122342532 (ifng1)
Cytokines and neuropeptides [BR:ptet04052]
 Cytokines
  Interferons
   122342532 (ifng1)
Glycosaminoglycan binding proteins [BR:ptet00536]
 Heparan sulfate / Heparin
  Cytokines
   122342532 (ifng1)
SSDB
Motif
Pfam: IFN-gamma LMBR1
Other DBs
NCBI-GeneID: 122342532
NCBI-ProteinID: XP_043092311
LinkDB
Position
4:complement(6719218..6721149)
AA seq 182 aa
MIAQHAMALFWGVCLLTLGWMTYGEASVSENLDKSIDELKMHYIKNDSELHNAHPVFIRV
LKDIKVNLEEPEQNLLMSIIMDTYSRIFTRMKNDSQDEATKERLAHVQEHLKKLQENYFP
GKSAELKAYAETLWAIKEDDPVVQFKALFELKRVYREATQLRNLKNKERRRRQAKITKKQ
KS
NT seq 549 nt   +upstreamnt  +downstreamnt
atgattgcacaacacgcgatggcccttttctggggagtatgtttgttgactttaggatgg
atgacatatggcgaggccagcgtctctgagaacctggacaagagcatcgacgagcttaaa
atgcactatataaaaaatgacagtgagctacacaatgcacatcctgtcttcatacgggtc
ctaaaagacataaaggtgaatcttgaggaacctgagcagaatcttttgatgagcatcata
atggatacgtacagtaggatatttacccgcatgaagaatgatagtcaggatgaggctaca
aaagaaagactggcacatgttcaggagcatttgaaaaaactgcaagaaaactatttccca
ggcaaaagtgcagagctcaaggcatatgcagaaaccctatgggcaatcaaggaagatgac
ccagtcgtccagttcaaagcattgttcgagctgaagcgcgtctacagagaagcaacacag
ctgagaaacctaaagaacaaagaacgcaggagacgacaagccaaaatcacaaaaaagcag
aagtcttaa

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