Puntigrus tetrazona (Sumatra barb): 122342532
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Entry
122342532 CDS
T08985
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform X1
KO
K04687
interferon gamma
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03050
Proteasome
ptet04060
Cytokine-cytokine receptor interaction
ptet04217
Necroptosis
ptet04350
TGF-beta signaling pathway
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122342532 (ifng1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122342532 (ifng1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122342532 (ifng1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122342532 (ifng1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122342532 (ifng1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptet03051
]
122342532 (ifng1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122342532 (ifng1)
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122342532 (ifng1)
Proteasome [BR:
ptet03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122342532 (ifng1)
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
Interferons
122342532 (ifng1)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Cytokines
122342532 (ifng1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
LMBR1
Motif
Other DBs
NCBI-GeneID:
122342532
NCBI-ProteinID:
XP_043092311
LinkDB
All DBs
Position
4:complement(6719218..6721149)
Genome browser
AA seq
182 aa
AA seq
DB search
MIAQHAMALFWGVCLLTLGWMTYGEASVSENLDKSIDELKMHYIKNDSELHNAHPVFIRV
LKDIKVNLEEPEQNLLMSIIMDTYSRIFTRMKNDSQDEATKERLAHVQEHLKKLQENYFP
GKSAELKAYAETLWAIKEDDPVVQFKALFELKRVYREATQLRNLKNKERRRRQAKITKKQ
KS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgcacaacacgcgatggcccttttctggggagtatgtttgttgactttaggatgg
atgacatatggcgaggccagcgtctctgagaacctggacaagagcatcgacgagcttaaa
atgcactatataaaaaatgacagtgagctacacaatgcacatcctgtcttcatacgggtc
ctaaaagacataaaggtgaatcttgaggaacctgagcagaatcttttgatgagcatcata
atggatacgtacagtaggatatttacccgcatgaagaatgatagtcaggatgaggctaca
aaagaaagactggcacatgttcaggagcatttgaaaaaactgcaagaaaactatttccca
ggcaaaagtgcagagctcaaggcatatgcagaaaccctatgggcaatcaaggaagatgac
ccagtcgtccagttcaaagcattgttcgagctgaagcgcgtctacagagaagcaacacag
ctgagaaacctaaagaacaaagaacgcaggagacgacaagccaaaatcacaaaaaagcag
aagtcttaa
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