Puntigrus tetrazona (Sumatra barb): 122343507
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Entry
122343507 CDS
T08985
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04260
Cardiac muscle contraction
ptet04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122343507 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122343507 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
122343507 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122343507 (cacna2d1a)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122343507 (cacna2d1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
FdsD
MCP-like_PDC_1
DUF1151
Motif
Other DBs
NCBI-GeneID:
122343507
NCBI-ProteinID:
XP_043093948
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All DBs
Position
4:complement(10201993..10264346)
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AA seq
1091 aa
AA seq
DB search
MSVRRIMDALRLPVAVLLLLSVFSSGSAIQFPDSHLTRKWAMQMQEELVQLIDAETGIQE
LQKIFLQFRNHYNVKQNNATQLVAKAAREIEKLLASRSTALEALATEAERLQKEHQWKDD
LDVNDTVYYKAKRKNNDSDTLQNVAGSGSKIEFSVDPYFDRMVSNSTSAVHIPTDIYEGS
TIILNELNWTAGLDDTFRKNKEADPSLLWQVFGSATGLARYFPASPWGDGKYKENEIDLY
DVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNIVSFNN
SAKSVACFENLVQANVRNKKILKEAVQKITANGTTDYKIGFREAFDQLSSMNVSRANCNK
IIMLFTDGGEDRASEIFEEYNREKKVRIFTFSVGQHNYDKTPIQWMACNNKGYYYEIPSI
GAIRINTQEYLDVLGRPMVKEYKKAKSVQWTNVYVDALQLGLVITGTLPVFNKTRSSQVK
NKSQSQLILGVMAVDVSLGDIKKLTPHYTLGPNGYYFAIDPNGYVLLHPNLQSKDRKSQE
PVTLDFLDAELEDEVKVEIRRDMINGGMNQKRFQTLMKSQDKRYIDRGIRTYTWGPVHDT
DYSLALVLPDYSVSYIKATIVDTITQAKSWKVSENSEEAVFESLHVDRFEEYGYTLIAPR
DYCAELKSQTDNNTQFLTDFIEYIDTNSPYHCKMELINRLLLDAGITAELAKYWNEQGQN
ERIRAKFVATDGGVTRVYPASAGLEWTEQAETYKSSFYKRSLDNNIYVFTSSPYASNDSV
LVSRAMDLRVDEFMLKPAVVGVKLDKQTWMETFINATVTPKCIGEICGCRRDDSNLDCFL
LDDGGFLVMTNKDLYINKIGHFFGMIDPSLMRNLINESLFSVNITYDYQALCEPTRETKA
AAGLRSVYVPTIADILNIGWWASAAAWSILQQLFVSITFPNFLEAADLDGDSSEAPAKES
CIKEQKQYFFESDETTFKGTIDCQNCSRQFIAEKLPKTNLVLIVADTKEPCCQADEKYFS
QEEKPSPGPDPCEIAQNPRYRKGPTQCFDNNVSEQNEDCGGASGLSPSVVSVVILQLPLL
WLLIGRGHGLS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcagaagaataatggatgcgctcagactccccgttgctgttcttctacttctg
tctgttttcagctctggaagcgctatacagttcccagactcccatctgacccggaaatgg
gccatgcagatgcaggaggagttagtgcagttgattgatgctgagacgggcatacaagag
ctccaaaaaattttcctgcagtttcgaaaccactataatgtgaaacaaaacaacgctaca
cagctggtggcaaaagctgcacgtgaaatcgagaaacttcttgccagtcgttccacagct
cttgaggcgctggcgacggaagcggagaggctgcagaaggagcaccagtggaaggatgat
cttgacgtgaatgataccgtctactacaaggccaagcgaaagaacaacgactctgacaca
ctccagaatgtggcaggcagtggcagcaagatcgaattcagtgtggatccttatttcgat
cgcatggtttcaaacagtacatcagcggtgcacattcccaccgatatctatgagggctcc
actataatcctgaacgagctaaactggacagcgggtttggatgacacctttaggaagaac
aaggaagctgacccgtccctcctctggcaggtgtttggcagcgcaactggcctggcgaga
tacttcccagcttccccgtggggtgacggaaagtacaaggaaaacgagatcgacctgtat
gatgtacgccgaaggccctggtatattcaaggtgcagcttcacctaaagacatgttgatc
ctggtggacgcgagtggaagcgtgtcaggcctgacactgaagctcattcgcacttctgtc
agcgagatgcttgagactctctccgacgacgattacgtcaacatcgtctctttcaacaat
tcggccaagtcggtcgcctgctttgaaaacctggtccaagcgaacgtccgcaacaagaag
attctgaaggaggcagtccagaagatcacagcgaacggcaccactgactataaaatcggc
ttcagggaggcttttgaccagctctcctcaatgaatgtttcaagagcaaattgtaataag
atcatcatgctgttcactgacggaggggaggaccgagcttcagagatctttgaagagtat
aacagggagaagaaggttcgaatcttcaccttttccgtgggccagcataactatgataag
acgccgatccaatggatggcttgcaataacaaaggttattattatgagatcccctctatc
ggagccatcaggatcaacacccaggagtacctggatgtgttgggcaggcccatggtgaaa
gaatacaagaaagctaaaagcgtgcagtggaccaacgtttacgtggacgctctacaattg
ggccttgtgattacaggcaccctgccagtgttcaataagaccaggagcagccaagtcaag
aacaagagccagagccagttgattttgggggtgatggccgtagacgtgtctctgggtgac
atcaagaagctgactccacattacactctcggaccgaatggctattacttcgccatcgac
cccaacggctacgtgctgcttcatcccaaccttcagtcaaaggatcgcaagtctcaagaa
cccgtgacgctggacttcttggatgcagagctagaagacgaagtgaaggttgagatcaga
agagatatgataaatggtggaatgaatcaaaagagattccaaacactaatgaagtctcag
gataagcgttacatagacagaggcatcagaacctacacttggggtccagtccatgacaca
gactacagtctcgctttagttcttcccgattacagtgtcagctacatcaaggccactata
gtagataccatcactcaggccaaatcttggaaagtctcagaaaattccgaagaagctgtt
tttgaaagcctgcacgtggacagatttgaagagtatggatatactttaatagcacccaga
gactactgcgcggagctgaaatctcagacggacaacaacacacagttcctcacagacttc
attgagtacattgacacaaattccccgtaccactgtaagatggagttaataaacagactg
ctgctggacgctggcatcaccgctgaactggccaaatactggaacgaacaggggcagaat
gagagaatcagggctaagtttgtggcgacagacggcggagtcactagagtctatcctgcg
agtgctggtttagaatggaccgaacaggcagaaacgtacaagtctagtttctacaagaga
agtctggacaataacatttacgtctttacatcatcgccgtatgcatctaatgattcggtt
ttggtgagcagagcgatggatctgagagttgatgaattcatgctgaagccagcagtggtc
ggtgtaaaactggataagcagacttggatggaaaccttcatcaacgctactgttacgccc
aaatgtattggtgaaatctgtgggtgcaggagggacgatagcaatctggactgctttctt
ctggatgacggaggcttccttgtcatgaccaataaggacctttatatcaataagatcgga
cactttttcggtatgatcgaccccagcctaatgagaaatctgattaacgaatccctattc
tccgtcaacataacctacgactaccaggccctctgtgaacccaccagagaaactaaagcc
gccgctggcctcagatcagtctatgtgcccaccattgctgacatcctgaacattggttgg
tgggcttctgcagcagcctggtcaatattgcagcagttgtttgtcagcatcacatttcct
aacttcctcgaggcagcggacctagacggtgattcgtctgaagcaccagctaaagagagt
tgcattaaagagcagaaacaatatttctttgaaagcgatgagacgacatttaaggggact
attgattgccagaactgctccaggcagttcatagccgaaaagcttccgaagacaaatctg
gtgcttatcgttgctgacacaaaagaaccgtgctgccaggctgatgaaaaatatttctcc
caggaagaaaagccttctccaggtccagatccctgtgagatagcccagaacccacgctat
cggaaaggtccgacacagtgctttgacaacaacgtaagcgagcagaacgaggattgcggt
ggtgcgtcgggtctgagtccatctgtggtgtccgtggtcatcctccagctgccgctcctc
tggcttctgatcggacgaggacacggactctcgtga
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