Puntigrus tetrazona (Sumatra barb): 122344663
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Entry
122344663 CDS
T08985
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122344663 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122344663 (trpc5a)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122344663 (trpc5a)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122344663 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
122344663
NCBI-ProteinID:
XP_043094124
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Position
1:complement(7071589..7134282)
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AA seq
1042 aa
AA seq
DB search
MNPMSHLYYKKSSYSPYRDRIPLQIVRAEVELSPEERSFLSAVEKGDYAGVQHALREAEV
YYNIDVNCVDPLGRSALLIAIENENLEVMELLLDHGVNTGDALLYAIRKEVVGAVELLLS
HRKPSGEKQVPSLMMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDQSEELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCFIIGLLFPVFSLVYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETEAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSFWYLCRWVHGRLCGSEAAPPEEDPHKHENLKEFTEKHADRLIQNQHYQ
EVIRSLVKRYVASMIRSAKTSEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRNYSSS
SEATLRDEVSDDGEACHHSDGSSIGAKGVSFKTITPSDPSYGVSALFRSISGMEVATTTT
AAESSAYREGKPKINGLRKNPSPSSSLSSVAPSRPALSRTWRRFSRFSSSKKNSFRRLGL
LFSRMGSHLPQPAGVTAATYTISDGLLHPPGAWQDLGFTRGAGPVTRSETNLNQVDVGAL
NEGEGAMTTNGQRANGRDVLLTLGPLSPPSSLHCASSFSASSSRLLDSNEDVFQGLVGPC
GGQTPDSSCWVTEQDDSVTTQL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgtcacatctatactacaaaaagagcagctactctccgtaccgggaccga
atccctctacagatcgtccgggcggaggtggagctatccccagaggagcgttcgttcctt
tctgccgtggaaaagggtgactatgcaggggtccagcatgcactacgtgaggcggaggtc
tactacaatattgacgtcaactgtgtggatccattgggccgcagtgcgcttctaattgcg
attgagaatgagaaccttgaggtgatggagctgcttctggatcatggagtgaacactgga
gacgctctgctttacgccatccgcaaagaggtggtgggagctgtagagttattgctgtcc
cacaggaaacccagtggagaaaaacaggttccatcattaatgatggatgcccagttttct
gagttcacacctgacatcactcccatcatgcttgccgcccacacaaacaactatgagatc
atcaaactcctggtccaacgaaaagtcaccatccctcggccgcaccagatccgctgtgac
tgtgtggagtgtgtgtccagctctgaggtggacagcttacgtcactctcggtcccgtctc
aacatctataaagcactcgccagcccctctctcatcgccctctccagcgaggatcccatc
ctaaccgccttcagactgggatgggaactaaaggagctcagtaaagtggagaatgagttt
cgacaagagtacgaggagctttctcaacagtgtaagctctttgccaaagacctgctggac
caggcacgtagctcccgtgagctggagaccatcctcaatcaccgtgatgaccagagcgag
gagctggacccacgagagtgccgggacttggccaaactcaagttggccattaaatatcac
cagaaagagtttgtggcacagccaaactgtcagcagctcttggccacattatggtatgac
ggctttcctggctggcggcgccgtcactgggcagttaagctggtcatgtgcttcattatc
ggcctgctcttccctgttttttcgctggtctacctgctggctccaaaaagcacactgggg
ctcttcattaaaaaacccttcatcaaatttatctgccacacagcctcctacctcaccttc
ctcttcctcctcctcctagcctcacagcacatagcacgcaccaacctacacatgcagggc
cctccgcccactgtggtggagtggatgatactaccttgggtgctgggctttatatgggct
gagattaaggagatgtgggacggaggttttaatgagtacgtccatgactggtggaacctg
atggattttgccatgaactctctctatttggccactatatctttgaagattgtcgcgtat
gtcaagtacaacagttctcgtccacgagaggaatgggagatgtggcatccgaccctgatt
gctgaggctttgtttgccatcgctaacatcttcagctcgctccggctcatctccctcttc
acggccaactctcacctgggcccgctgcagatctcacttggccgcatgctgctggatatc
ctcaagttcctcttcatctactgtctagtgcttctggccttcgccaatggactcaaccag
ctatacttttactacgagactgaggcagccgatgaacccaaccattgcaaggggatccgc
tgcgagaaacagaacaatgcattctctacgttatttgaaacacttcagtcactgttctgg
tcgatatttggcctcctgaatttgtatgtaacaaacgtgaaagctcggcacgagtttaca
gagtttgttggagccactatgttcggcacctacaacgtcatctcattggtggttcttctc
aacatgctcatcgctatgatgaacaactcctaccagctcatcgcagaccatgctgacatc
gagtggaagtttgctcgtaccaagctgtggatgagttatttcgatgagggtgggacactc
cccccaccgttcaacatcatccccagccctaagtcattctggtacctgtgtcgatgggta
cacgggcggctctgcgggtcagaagctgctccgcctgaagaagacccccataaacatgag
aatctgaaggagtttacggaaaagcatgctgacaggctgatacagaatcaacattatcag
gaggtcatccgtagcctagtgaagaggtacgtggcgtccatgatccgcagcgccaagaca
agcgaagggctgacggaggagaatttcaaggagctgaaacaggatatttccagtttccgc
tacgaagttctggaccttcttggcaaccgaaagccaccccggaggaactattcctccagc
agcgaggccactcttcgagacgaggtcagcgacgacggtgaggcctgccaccacagcgac
gggagcagcatcggggccaaaggtgtgtctttcaaaaccataacaccttcagacccgtcg
tacggagtctccgccctctttcgttccatctccggaatggaggtcgctacgacgacgaca
gcggcggaatcatctgcatacagggagggtaaaccaaagatcaacggactgaggaagaac
ccctcgccctcctcttccctgtcctcagtggctccatcaagacctgcactttcacgaact
tggaggcgcttttcccgcttctcgagttccaagaagaactccttcagacggctcggcctg
ctgttctcacgcatgggcagccaccttccgcagccggcaggtgtcaccgctgcaacctac
actatctcagatggattgcttcacccgccgggggcttggcaggacttgggcttcaccagg
ggtgccggacccgtcacccgaagcgagaccaaccttaatcaggtggacgtgggtgcttta
aatgagggcgaaggtgccatgacgaccaatggacagagagctaacggaagggatgtttta
ctgacattaggacctctgtcccctccctcttccctgcactgtgcttccagtttctccgcc
tccagctcccgcctcctggactcaaatgaggacgtgttccagggattggtcgggccctgt
ggcggacaaacgccagactcctcctgctgggtaacagaacaggacgattcggtgaccacg
cagctatag
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