Puntigrus tetrazona (Sumatra barb): 122345294
Help
Entry
122345294 CDS
T08985
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04137
Mitophagy - animal
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04621
NOD-like receptor signaling pathway
ptet04622
RIG-I-like receptor signaling pathway
ptet04920
Adipocytokine signaling pathway
ptet05132
Salmonella infection
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122345294 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122345294 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122345294 (traf2b)
09143 Cell growth and death
04210 Apoptosis
122345294 (traf2b)
04217 Necroptosis
122345294 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122345294 (traf2b)
04622 RIG-I-like receptor signaling pathway
122345294 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
122345294 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122345294 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
122345294 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122345294 (traf2b)
04121 Ubiquitin system [BR:
ptet04121
]
122345294 (traf2b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122345294 (traf2b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122345294 (traf2b)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122345294 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
ADIP
zf-C3HC4_2
zf-RING_5
zf-RING_4
zf-C3HC4_4
Paramyxo_NS_C
TMF_DNA_bd
zf-RING_UBOX
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122345294
NCBI-ProteinID:
XP_043095222
LinkDB
All DBs
Position
5:complement(24633302..24652541)
Genome browser
AA seq
573 aa
AA seq
DB search
MDNAACHRGVIYSVVSMMTHTRTGLTRSLTVRSNPQYLMISTSSTVGKWKAMARSLPSSL
DSTLPGISREVLSVSMEPKYQCQQCKEILRKPFQAQCGHRFCVFCFKQLTSSGPTPCEAC
RAEGIFEETTSMLNITVAFPDNAARREIDSLPAKCPNDGCSWSGTLKEYEGQHEGRCDFE
RVKCEACQALILVSEKERHNERECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQCKDC
GKKKIPREKFQEHIKSCAKSKSACQFSEIGCRAVVDNGKQQEHEQTSMTDHLRLMLAVLS
SVRLRAEGAGEWQEDSGLGLYRGPEDASPAGAHAAGHHAGRGGSPGVQQKVTALENIVCV
LNREVERSALTLEALSRQHRLDQEKIENLSNKVRQLERTLTMRDLQLAESEQSLRELQFC
TYDGVFIWKIADFSRRRQDAVGGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLS
LFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTSFQRPISEMNIASG
CPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcggcttgccatcgtggcgttatctatagtgtcgtgtctatgatgacgcac
acacgtactggactgacacgatcactgacggttagaagtaacccacagtatttgatgatc
agcacttctagcactgtgggtaaatggaaggctatggcacgatctttaccttcttcattg
gactccaccttacctgggatatctcgagaggtgctgtctgtgtccatggaaccaaaatat
caatgccagcagtgcaaagagattcttaggaaacctttccaagcacagtgtggacatcgc
ttctgtgtgttctgtttcaaacaactcaccagctcggggcccacaccctgcgaagcctgc
cgtgccgagggtatatttgaagagacaacgtctatgctcaatattacagtggcatttcct
gataatgcagcacgaagggaaattgatagtttaccagccaaatgcccaaacgatggatgt
agctggtctggaacattgaaagagtatgagggtcagcacgaaggtcgttgtgactttgaa
cgtgtaaaatgtgaagcatgtcaagcgctcatcttggtcagtgagaaagaacgccacaat
gagcgggaatgcgaggccagaaccctcaactgcaaatactgcaaggtcacattcaacttc
aaggaaattaaggctcatgatgaaatatgtcagaaattccccatgcaatgcaaagactgc
ggtaaaaagaaaatccccagagagaagtttcaagaacacatcaagtcttgcgcgaagtct
aagtcagcatgccagtttagtgaaattggctgcagggccgtggttgacaatggtaagcag
caggagcatgagcagaccagcatgacggatcatctgcgtctcatgctagctgtgctgtcc
tctgtgcgcctgcgggccgagggcgccggagagtggcaggaagattctggactgggattg
taccgcggacctgaggatgcatctccagccggggctcacgctgccggccatcatgcaggg
agaggaggcagtcctggtgtgcagcagaaagtcacggcgttggagaacatagtgtgtgtg
ctgaacagagaggtggagcgctcggccctcaccctggaggcactgtcccgtcaacatcga
ctagaccaggagaagatagagaacttgtcaaacaaggtgcgtcagcttgaacggacttta
acaatgcgagatcttcagttagcagagtcggagcagtccttgcgggagcttcagttttgc
acatacgatggagttttcatttggaaaatagcagacttctcacgtcgcagacaagacgct
gtgggcggccgggcacctgccatgttctcacctgcgttctactccagtaaatatggctat
aagatgtgtctgagactctacctgaacggtgacggcacaggccggggcactcatctttct
ctgttttttgtggtcatgaggggcaaatacgatgcactgctgaagtggccctttagccag
aaggtgacactgatgctgttggaccagaacaaccgagagcacatcattgatgccttcagg
cctgacgtgagctccacatccttccagagacccatcagtgagatgaacatagccagcggt
tgtcctctcttctgtcctctggccaagctggcaggcaaaagctcatatctgagagatgac
accatatttattaaagccatagtcgacctcactggcttataa
DBGET
integrated database retrieval system
