Puntigrus tetrazona (Sumatra barb): 122345572
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Entry
122345572 CDS
T08985
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04137
Mitophagy - animal
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04621
NOD-like receptor signaling pathway
ptet04622
RIG-I-like receptor signaling pathway
ptet04920
Adipocytokine signaling pathway
ptet05132
Salmonella infection
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122345572 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122345572 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122345572 (traf2a)
09143 Cell growth and death
04210 Apoptosis
122345572 (traf2a)
04217 Necroptosis
122345572 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122345572 (traf2a)
04622 RIG-I-like receptor signaling pathway
122345572 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
122345572 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122345572 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
122345572 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122345572 (traf2a)
04121 Ubiquitin system [BR:
ptet04121
]
122345572 (traf2a)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122345572 (traf2a)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122345572 (traf2a)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122345572 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-C3HC4_4
zf-RING_5
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
DEC-1_N
zf-RING_2
zf-RING_6
MATH
zf-TRAF_2
zf-ACC
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
122345572
NCBI-ProteinID:
XP_043095764
LinkDB
All DBs
Position
5:9008526..9016381
Genome browser
AA seq
578 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICLKILRRPFQAQCGHRFCSYCFNK
AVSSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEECSWTGTIKE
YEANHEGKCDFRILPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMTVEKEKIHDHEQACS
YEHLNLLLHFIMGIKVNLESLQPQSLELASHKIHELHQSLRELELKMGQLSGAGAPVQGA
CAPLPPPPAPTLGTSFTPLPTAVGAALELQLHSEKTKVVELSRRCQELELKVSTFENIVC
VLNREMERSATTMEAYNRQHRLDQDKIEILNNKIFMQVRQLERTVGLRDLSIVEMEAKMR
EMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGR
GTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDM
NIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggaaccctcaccaccatcttcattagaaggcaacaaacctggcttcccc
aagaaaatactcgccaacaagctggaggacaagcatctgtgcaatatctgtctgaaaatc
cttaggagaccgtttcaggcgcagtgcggacatcgtttctgttcttattgttttaataaa
gcagtgagctccggaccacagaaatgcagtgcctgtataaaggaggacatatttgaagaa
ccaacatcaatattgaaacagggctgtgcttttcctgacaatgctgccaaaagagaagta
gaagctcttgaagctgtttgcatcaatgaggaatgcagctggaccggcaccatcaaagaa
tatgaggcaaaccacgagggaaagtgtgacttcaggatccttccctgcccatcatgcaaa
gagcttctgagagccaatgaacttgaacgtcacaatgagagagaatgcccagaaaggact
cttaattgtaaatactgcaaggagccatttcattttaaaaacattaaggcccatgatgag
atatgccctaaatatccaatgatatgtgaaggctgtgccaagaaaaaaatccccagagag
aaatacgtggaccacattaaactgtgcaccaaattcagaacaccttgcagatttcacgtc
gtaggctgtgatatgacggtggaaaaggagaagatccacgatcatgagcaagcctgttcc
tacgagcacttaaacctcctcttgcacttcatcatgggaatcaaggtgaacttggagagt
ctgcagcctcagagtctggagctggccagccataagatccacgagctgcatcagtctctg
cgggagctggagctaaagatgggccagctgagtggagcaggggctcccgtgcagggggcc
tgtgcgccgctgccaccacctccggccccgacgctgggtacatctttcaccccgctgcct
acagccgtcggggcagccttggagctgcagctacacagtgagaagaccaaagtggtagag
ctcagccgtcgctgtcaggagctggagctgaaggtaagcacctttgagaacatcgtctgt
gtgctcaaccgtgagatggagcgctctgccaccaccatggaggcctataaccgtcagcac
cggcttgaccaggacaagattgagatactcaacaacaagatttttatgcaggtacggcag
ttggagaggacagttggccttagggatctctccatcgtggagatggaggcaaagatgagg
gagatgtctgctgccacttatgacggtgtatttgtgtggaagatctctgacttctcgaaa
aagagacaagatgctgtggccggacgggcacctgctatgttctcacctgctttttacaca
agcaaatatggctataagatgtgtttgcgcatctatctgaatggggatgggacgggacgg
ggtactcacttgtctctgttcttcgtggtgatgaggggacacagtgatgccttgcttaag
tggcctttcaatcagaaggtcaccctcatgttgctggatcagaacaacagggagcacatc
atcgatgccttccggccagacatttcctcttcctccttccagaggcctgtgagtgacatg
aacattgccagcggctgccctctcttctgccctctctccaaactagactccaagaactcc
tacatccgagatgataccatcttcatcaaggccatcgttgacctcacaggcctttaa
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