Puntigrus tetrazona (Sumatra barb): 122346688
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Entry
122346688 CDS
T08985
Symbol
rapgef4b
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04081
Hormone signaling
ptet04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
122346688 (rapgef4b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
122346688 (rapgef4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122346688 (rapgef4b)
Membrane trafficking [BR:
ptet04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122346688 (rapgef4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
122346688
NCBI-ProteinID:
XP_043097421
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All DBs
Position
6:3269459..3296015
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AA seq
1005 aa
AA seq
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MVAVHASAHSVASSEWIICLDKRPAERSGEDVDIILARLKGVKAFERFHPNLLQQICMCG
FYEYLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGVGTAFGESILD
NTPRHATIVSRENSELLRIEQREFKTLWEKYRQCMAGLLAPPYGVMDSGATNDRMPDKEN
LNSDPLNFMSKNLNKVPSEKILRAEKVLRNAILARAPHMIRDRKYHLKTYRQCCVGTELV
DWLLQQSSCVHSRAHAVGMWQVLLEEGVLNHVDHELNFQDKYLFYRFLDDEEEDAVLPSD
DEKREAEEELQETLLFLSQMGPDAHMRMILRKQPGQRTAEDLEIIYDELLHIKALSHLSN
TVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVIYGKGVVCTLHEGDDFG
KLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHELDVLVLQKSLR
PSSHGNVPAHFKYTVMSGSPEKILEHLLETMRLDIHFSDPDPALDDFVLMHCVFMPNSQL
CPALLAHYHSQASQGSEQERLDYSVASKRRVLSLALRWAALQGHHLLEDDTALSFLEELH
GFVSNDARVLRPLKELLPELERIIKQYPDDARTSQKKHKVLLRQFSSGEERLAKKQPIRS
FDDILLKVYCSDQTYTTIRVPVLATGREVTAAVADKLGSTEELLLINLSPSGEKQILKPN
DVSVFQSLGVNGRLFVCSRELLDSLNPLPEQEGPSTGSMSSFELMSSKDLAFQMTQYDWE
LFSCVHEYELVYHTFGRQAYRRSTANLELFLKRFNQVQLWVVTEVCLCGTLSKRVQLLKK
FIKIAAHCREFKNLNSFFAIIMGMCNPAVSRLSQTWEKLPSKFKKFYAEFESLLDPSRNH
RAYRLTVAKMEPPIIPFMPLLIKDMTFTHEGNKTFIDGLVNFEKMRLIANTVRAVRHCRS
QPFNAEVSPASKNPQEVRNYVRQLNVIDNQRTLSQLSFRLEPRRG
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggtgcacgcctctgcgcactccgtggcctcctcagagtggatcatctgcctg
gacaagaggccggcagaacgctcgggagaagatgtggatatcattctggctcggctgaag
ggtgtgaaggccttcgagaggtttcaccccaacctgctgcagcagatctgcatgtgcggc
ttctatgagtacctggagaaaggcatcaccttgtatcggcagggtgacatcggcaccagc
tggtacgcggttctgtctggatctctggatgtgaaagtgtctgagacggccaaccatcag
gatgctgtaacaatctgtactttgggagtgggaacagcatttggggagtcaattctggat
aacactcctcgacatgccacgattgtcagccgagagaacagcgaacttctgcgcatcgaa
cagagggagttcaaaaccctgtgggagaaatacaggcagtgcatggcagggcttctcgcc
ccgccgtatggagtgatggacagtggagctacaaacgatagaatgccggacaaagagaat
ctcaacagcgaccctctcaatttcatgtcaaaaaacctgaataaggtcccgtcagagaag
attttgagggcagaaaaggtcttacgtaatgctatactggcccgagctccccacatgatc
agagatagaaaatatcatctgaaaacctacaggcagtgttgtgtgggcacggagctggtc
gactggctgcttcagcagagctcgtgtgttcacagtcgggctcacgctgtgggaatgtgg
caggtgctgctggaggaaggggtcctgaatcacgtcgaccatgagctgaactttcaagat
aagtaccttttttaccgtttccttgatgacgaggaggaggatgcagtgttgcccagcgac
gatgagaaacgtgaagctgaggaagagctgcaggagaccctcctcttcctctcccagatg
ggccctgacgcacacatgcgaatgatcctcaggaaacagccaggtcaaagaacagctgaa
gacctggagattatttatgatgagctgctgcacatcaaagctctctctcatctatctaac
actgtgaagcgagagctcgccggtgtcctcatctttgagtcgcatgccaaagcaggcacc
gtcttgtttaatcaaggggaggaaggcacttcttggtatattatccagaagggatcagta
aatgttgttatctatggcaagggtgtggtgtgtacgctgcacgaaggagatgattttggc
aaactggccttggtgaacgatgccccccgagctgcttccatcgtactcagagaggacaac
tgccacttcctgagagtggacaaagaggacttcaaccggatactcagggatgttgaagca
aacaccgtgcgtctaaaagagcatgaactggatgttctggtactgcagaagagtctccgg
ccctccagccatggaaacgtcccagcccacttcaaatacactgtgatgtcaggcagccca
gagaagattctggagcatctgctggagacaatgcgactggacattcatttctctgaccca
gatccagctctggatgatttcgtgctcatgcactgcgtcttcatgcccaacagccagctg
tgccctgcccttcttgcccactatcactctcaggcctctcagggttcagaacaggagcgt
ctagactactctgttgccagcaagagacgggtgctcagcttggctctgcgctgggctgcc
ctgcagggccaccatctgctggaggatgacactgcgctcagctttctggaggaactgcac
gggtttgtatccaacgatgcaagagttttgcgtccactgaaggagctgctgcctgagctg
gagaggatcatcaagcagtacccggatgatgcacgaacctctcaaaaaaagcataaagtc
ctgctgcgacagttcagctccggagaggagaggcttgcaaaaaagcagccaataaggagc
tttgatgacattctgctgaaggtgtactgcagcgatcaaacttacaccactattcgtgtt
cctgtgctggccacggggagagaggtgaccgcagctgtagcggataaactgggatccacc
gaagagctgcttttgataaacctcagcccatctggagagaagcagatattaaagcccaat
gatgtatcggtgttccagtcgcttggagttaacggacgattgtttgtctgctctagagaa
ctgcttgattcactgaatcctcttccagagcaggaaggtccctccacaggctctatgtcc
agttttgagctgatgagctctaaagatctggccttccagatgacacagtatgactgggag
cttttcagctgtgtacacgagtatgagctggtgtatcacacgttcggacggcaggcatac
agacgctccacagccaatctggagctgtttctgaagcgctttaatcaggtgcagctgtgg
gtggtcacggaggtctgtctgtgcgggacgctcagcaaacgggtacagctactcaagaag
ttcatcaagattgcagcacactgtagagagtttaagaatctgaactctttcttcgccatt
attatgggcatgtgcaacccagccgtcagcagactcagccagacatgggagaaactgcct
agtaaattcaagaagttctacgcagagtttgagagtttactagatccatctaggaatcac
cgtgcataccgcctcactgtggctaagatggagccgccaatcattccctttatgcctctg
ctcattaaagacatgacattcactcatgaggggaataagacttttattgatggactggtg
aactttgagaagatgcggctgatcgctaacacagtccgagcggtgaggcactgcagaagc
caaccgttcaatgctgaggtgtctccggctagcaagaaccctcaggaagtgaggaattac
gtgcgtcaattgaatgtgattgacaaccagagaaccttatcccagctgtccttcagactg
gagccgaggcggggctaa
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