KEGG   Puntigrus tetrazona (Sumatra barb): 122346811
Entry
122346811         CDS       T08985                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RAD18-like
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptet04121]
    122346811
   03400 DNA repair and recombination proteins [BR:ptet03400]
    122346811
Enzymes [BR:ptet01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122346811
Ubiquitin system [BR:ptet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122346811
DNA repair and recombination proteins [BR:ptet03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122346811
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_6 zf-RING_UBOX zf-RING_2 SAP zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 zf-WRNIP1_ubi zf-C3HC4_4 U-box zf-rbx1
Other DBs
NCBI-GeneID: 122346811
NCBI-ProteinID: XP_043097599
LinkDB
Position
6:20631970..20661207
AA seq 434 aa
MAHLNEADLPPNLSCLKSIDTLLRCPICFEFLNITMMTPCSHNFCSLCIRKFLSYKLLCP
VCNLPSTEQDLRNNRLLDDLVQNFQAARQKLCHSNLESPPISPETPVMVIKGKAARQKGL
RNEANTLSHFFQKKIPVTPSSEAQTSRKLHVPVKSESMEVCLQQLGHVKQENVEATNGVG
EDEKMDITAFPSTSHNKPLVKVECPVCEVGVPEQHINKHLDMCLSRDDKKERLRSGGRRK
AMPKLLYTLITVPKLKKMLKECHLSAQGSREQLVRRHXEFTQIYNSQCDALNPKSAEEIA
KEVENNERLKNQMESKRKPVIVTTKNQTAEEIEELHSVYRKQHCSEFSRLIAQVRGRLET
SKRAPIKQEGEKSTEETHSKGSQNSIQNTPQPLVSAMLKIKSEEMDRVIELPSRSSSPTI
SEVSVSSSISDIFC
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggctcatctaaacgaagcggacttaccgccgaacctgtcatgtctgaaaagcatagac
accctcctccgttgtcctatctgctttgagtttctcaacatcaccatgatgaccccgtgt
tctcataacttttgttctctgtgtatacggaagtttctgtcctacaagttgctgtgtcct
gtttgtaacttgccatcaacagaacaagacctgaggaacaacagattattagatgactta
gttcagaacttccaagcagcaaggcaaaaattgtgccactcaaatttggaatctccgcct
atttcaccggaaaccccggttatggtgatcaaaggcaaagcagcaagacagaagggcctc
agaaatgaagcaaacaccctcagtcattttttccagaagaagatccctgttactccttca
tcagaggcccaaacaagtcgtaagcttcacgtgccagtcaaatcagaatccatggaggtg
tgtttacagcagctaggtcacgtcaagcaagaaaatgtggaggccacaaatggagtcggg
gaagatgaaaagatggatataactgcatttccttccacgtcacacaataaaccactggtt
aaagtggagtgccctgtctgtgaagtaggtgttcccgaacagcacattaataaacatctg
gatatgtgcttgagcagagatgataaaaaggagagattgagaagtggtggaaggagaaag
gcgatgcctaagctcttgtacactttgattactgttccaaagctgaagaagatgcttaaa
gagtgtcacctgtccgctcaaggcagtagagagcagctagtgcgacgccacncagaattc
acccaaatctataactcccagtgtgacgcactcaaccccaaatcagctgaagaaattgcc
aaagaagttgagaacaacgagaggttaaagaatcaaatggagagtaaacggaaacctgta
atcgtcactacgaagaatcagactgctgaagaaattgaggagttgcactcagtgtaccgg
aagcagcattgtagcgaattttcccgtttgattgcccaggtcagaggtcgtctggagaca
tccaagagagcaccgatcaaacaggaaggggagaagtctacagaggaaacgcactccaaa
ggttcacaaaacagcattcagaacactccccagcctctcgtttctgcaatgctgaaaata
aagagtgaagagatggacagggtaattgagcttccatcaagatcatcaagccctacaatc
agtgaagtgtcagtcagcagctccatctcagatattttctgttga

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