Puntigrus tetrazona (Sumatra barb): 122347067
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Entry
122347067 CDS
T08985
Symbol
pkp1b
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122347067 (pkp1b)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122347067 (pkp1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Atx10homo_assoc
HEAT
Motif
Other DBs
NCBI-GeneID:
122347067
NCBI-ProteinID:
XP_043098001
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Position
6:26571278..26584483
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AA seq
764 aa
AA seq
DB search
MMPEPLKSALSIGDVEDTSLALPSDRELRSAQQRVLEQVHTIKRSKSKYSSKSVSGLTSP
ASPESDSVFYDFKFSPGASLSGPSFSRGGTMTNGAMQRQGYVRQSTNSRSSSGQRVSSGS
SKYDRSLYSAAGTLPAQTRTSNQLYSYNATRSAPDLGFQSTSAALRTQSGRQTLTKAPVA
APVQAYGNGSAARMPNVKRAARRPSSLQSNGESRLSVIRTGQAKDVSGMNAEKLMADMTM
QDAVDYLFSTDESYQLCGAAYIQHSTFTDDKAKQEVMTLKGIPPLVNLLNSPSPQVQETV
AAALRNVVFKNQPNKEEVQRCGGITQAVQLLADSSSETQKHLTGLLWNLSSADSLKPDLL
RTALPVLNEKVIEPFSASVDDNSNSSVAPEVFCNATACLRNLSSSKLANRQAMRNCKGLI
DSLMRYTENGLNSGTSDNQSLENCVCILHNLTYQLEAEMPSLFTKINTLASRAHNRSSSS
DAGPIGCFSSQSQKLQQEVRVNAVLIFQTLRYCHCEFSKGVSLPWMPSFSLSRLVVLQSG
FDFPVMEDNNPKGSGWLFHSKALQMYLNLLSSSERDATLEASCGALQNLTATDGIVSNVL
SHTIVQKLNGLKYISPLLQSANPALQNSAVALLGNLSRSTRTNKTMARQTLPQLVGFLNS
GLAKGDSSPEHDSTMATALHSAHALMKADPEIGKSLLNNSLINSLNNMSLNLGLPKSSTA
AGVLLHSLWSEKNIQSFLKKQGMNKKSFVNDTTSAAFKSLQVVD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaagtcggctctgtccatcggagacgtggaggacacgtccctc
gcgctgccgtccgaccgcgagctgagatccgcgcagcagagagtcctggagcaggtccac
accatcaagaggagcaagtccaaatacagcagcaaaagcgtgtctggactcacttcccct
gctagtcctgaaagcgacagtgtgttctacgacttcaagttttcccccggcgcgtctctc
agcggaccctcgttcagcagaggaggaaccatgacaaacggggctatgcaaaggcaaggc
tacgtgcgccagtccaccaactcccgtagctccagcggtcagcgggtgtccagtggctcc
agcaagtacgatcggagcctgtacagcgctgccggcaccctcccggcccaaacccggacc
agcaaccagctgtacagctacaacgccactcgcagcgctccggacctgggcttccagtcc
acctccgccgctctgcgcacccaaagcggccggcagaccctcaccaaggcgcccgtcgcc
gctcctgtccaggcttacgggaatggcagcgcggccagaatgcccaacgtcaagcgggcc
gcgagacggccgtcttccctgcagtccaacggggagtccaggctctccgtgatcaggacc
ggacaggccaaggacgtctctgggatgaacgcggagaagcttatggccgatatgacgatg
caagacgcggtcgactatctgttcagcacggatgagagctaccagctgtgcggagccgct
tacatccagcacagcaccttcaccgacgacaaggccaagcaagaggtgatgaccctgaag
ggcattcctccgctggtcaacctgctgaacagccccagtcctcaggtccaggagacggtg
gccgcagccctgaggaacgtggtcttcaaaaaccagcccaacaaagaagaagtgcagcgc
tgcggaggaatcacacaggctgtgcagctgctcgccgatagcagctctgagactcagaaa
cacctgacaggtctcctgtggaacctctcctctgcggatagccttaaacctgatctgctc
cgcaccgctctgcccgttcttaacgagaaagtcatagagcccttttcagcaagtgtagat
gacaactccaacagcagcgtggcaccggaggtcttctgcaacgccacggcatgccttcgc
aacctaagctcctctaagctggccaaccgtcaagccatgcgcaactgcaaaggccttatc
gactcgctcatgcgctacaccgagaacggcttgaattctgggacatccgacaaccagtct
ttggagaactgtgtctgcatcctgcacaaccttacctaccagctggaggccgagatgccg
tctctcttcactaaaataaacacgctggccagccgcgctcacaaccgctccagctcatca
gacgccgggccgatcggctgcttcagctcccagagccaaaaactgcagcaggaggttcgc
gtgaatgccgtcttgatatttcagaccctgagatattgccattgtgaatttagcaaaggc
gtctcattgccgtggatgccgtccttcagcttgtctcgtttggttgtgttgcagagcggc
ttcgactttccggtgatggaggacaacaatcccaaaggctccggctggctcttccactcc
aaagccctgcagatgtacctcaatctgttgagctccagtgaaagagacgccacgcttgag
gccagctgtggagcgctgcagaacctcacagccactgacggcatagtgtcgaatgtgttg
agtcacacgatcgtccagaagctcaacggtcttaaatacatcagtccgttgttgcagtcg
gccaatcctgccctgcagaacagcgcagtcgctctgctcgggaatctgtcccgatccacg
cgtacaaacaaaaccatggctcggcagactctcccgcagctggtcggctttctgaactca
ggcctggcgaaaggagactcgtcgcccgaacacgacagcaccatggccacggctcttcac
agcgctcacgctctgatgaaggccgaccccgagatcggcaagagtctgctgaacaacagc
ctgatcaactccctcaacaacatgagtctcaatctgggtctgccgaagtccagcactgca
gcaggagttcttcttcacagtctgtggtcggaaaagaacattcagagtttccttaaaaag
caaggcatgaacaagaagtcctttgtgaacgacacaacgtcggcagctttcaaatctctt
caagtggtcgactaa
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