Puntigrus tetrazona (Sumatra barb): 122347858
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Entry
122347858 CDS
T08985
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122347858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122347858
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122347858
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122347858
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122347858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
Spectrin_1st_PEPL
UPA-FIIND
CARD
DUF2115
Spectrin_4
Motif
Other DBs
NCBI-GeneID:
122347858
NCBI-ProteinID:
XP_043099047
LinkDB
All DBs
Position
7:complement(40696445..40704040)
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AA seq
564 aa
AA seq
DB search
MSRNKTTETSNENRPPVTYLVALNDKLQMNADKVEKNIIDAQHNLNKDIKRINEEKQPLY
RDYINKTILNSLDLLNSLNRDAAEASRLKHPHSEMIEMDVKQLRERVMKLREEYDRIYKA
SPTGKIHMKLDESEWELQRPSEVATDADIKYSVSSSEGQHECSETGLRWSSESDVTLEYR
FVDWKSLSKSILKKYKPCGPLMDITVTSGRLEEVQLPHCVCVDSSSNDVVKALHVKDGNV
SLETCELSGFHAKLVNPTFSFLAIVVEVQQYLKMKFHCETLVYRNTTSPLNFHVYLILKD
KKLKKEVEEKEQNNMEILKPTPDEALTLNDKYTLETSCVSKIKPESLKLTPGKSNFFDLH
LKDEKKSFELSIKTKDGLKVWDVNIEPGEFDKNSVSEWRQKKRNRSELIWQWWRRLLETA
RSPFETSLRSPSNELMRLRLDQAFQSSFSALTAHQSADTDTAQTQKRCKRGEGAEFVEKH
RTELIRKVSLVEPIADDMKPVIGDEKYQIVITSGTKQDKMRKLLEFLTTPKMKDKLYQSL
VKHEQYVVDFLENFGETVLNPNES
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaataaaaccacggagacctccaatgaaaacagaccacctgtcacttattta
gtggccttgaatgacaagttgcagatgaatgcagacaaagtggagaaaaacatcattgac
gcacaacataatctcaacaaggatatcaagaggattaatgaggagaagcagcccctgtac
cgagattacatcaacaagacaatcctgaactcgttagatctgctgaattctctgaataga
gatgctgctgaagcctctcggttgaagcaccctcattctgagatgattgagatggatgtg
aaacagctgcgagagcgtgtgatgaagctccgcgaggaatatgatcgcatttacaaagcc
tcccccaccggcaagattcatatgaaactggatgaatctgaatgggaacttcaacgacct
tctgaggtcgcaacagatgcagatatcaagtacagtgtcagctcctctgaaggacagcat
gaatgttcagagactggcctccgctggagctctgagagcgatgtgactttggagtatcgc
tttgttgactggaaatcactaagtaaatctattttaaagaaatacaagccatgtggacct
ttgatggacatcactgtaacctctggcagactggaggaagttcagctacctcactgcgtc
tgtgtagattcttcctcgaatgatgtagtgaaagctcttcatgtgaaggacggtaacgtt
tcattggaaacgtgtgaactgagcggattccatgccaagcttgtcaatcccaccttctcg
tttttggccattgttgtagaggtgcagcagtacctcaaaatgaaatttcactgtgagact
ttggtttatcgcaacacaacatctcccctcaactttcatgtgtacctgattttaaaggat
aaaaaactgaagaaggaagtggaggagaaggagcaaaacaacatggagattttaaaaccg
actccagatgaagcccttacactaaatgacaaatacactctggagacgtcttgtgtctcc
aaaatcaaaccagagagtttaaaattgacacccggcaagagcaacttctttgatttgcac
cttaaagatgaaaaaaaatcctttgaactcagtataaagacaaaagatggcctgaaagta
tgggacgtcaatatagaaccaggggaatttgacaaaaattcagtgtctgaatggaggcag
aaaaaaaggaatagatcagagctgatttggcagtggtggcggcgcttgctagagacggct
cgcagtccatttgaaacgtctcttcggtctcccagcaatgagctgatgcgacttcggctt
gatcaggcttttcagagcagcttttctgctctgacagctcaccagtctgcagacaccgac
acagcacagacacaaaaaagatgcaaacgtggcgaaggagctgagtttgtggagaagcac
aggacagagttgatcagaaaggtctcgctggtggagccaatagcagatgacatgaaacct
gtgatcggagacgaaaaataccaaatcgtcataacatcaggaacaaaacaagacaaaatg
agaaaacttctggaatttctgacaacacctaaaatgaaagataaactttaccaaagtctt
gttaaacatgaacaatacgttgttgattttttggagaattttggggagacggtcttgaat
ccgaatgaatcttga
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