Puntigrus tetrazona (Sumatra barb): 122350017
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Entry
122350017 CDS
T08985
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04514
Cell adhesion molecules
ptet04672
Intestinal immune network for IgA production
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122350017
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122350017
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122350017
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122350017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122350017
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122350017
Exosomal proteins of epithelial cells
122350017
Exosomal proteins of breast milk
122350017
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
122350017
NCBI-ProteinID:
XP_043102145
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Position
8:complement(19064496..19067367)
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AA seq
252 aa
AA seq
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MSPPKVLSFHLILMLSAFTGAADGYYHSSWAECIYSSPDLSDMVYIDNYIFNKDIVVQFN
STVGEYVGYTELGVKSARAWNSDGNILQQERAEVERFCKHNAQIRQSAITDKTVAPKVKL
SSVKLASGGHPAVLMCSAYRFYPHGIKVTWLKDNTPVKSDVTSTEELPNGDWYYQIHSHL
EYTPKSGEKISCMVDHAGLKKPLIVDWDPSLPESERNKIAIGASGLVLGVIIAAAGLIYY
KKKSAGRILVPT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgccgaaggtcttgagttttcatctcatattgatgctgtctgcattcactgga
gcagctgatggatactaccattcttcgtgggcagaatgcatctacagctcccctgatctc
agtgacatggtgtacattgataactatatcttcaataaagatattgttgtacagttcaac
agcactgtgggggagtacgtgggatacactgaacttggagtaaagagtgcacgagcatgg
aacagtgatggcaacattctgcagcaagagagagctgaggtggagagattctgtaaacat
aatgctcaaatcagacagagcgctatcactgataaaacagtcgcaccaaaggttaaactc
agttcagtaaagctggccagtggtggacatccagctgtgttgatgtgcagcgcttaccgc
ttctacccacatgggatcaaagtgacctggttgaaagacaacacacctgtgaagtctgat
gtgacctcaactgaagagctgcctaacggggactggtactaccagatccactcccacctg
gagtacacccctaaatctggagagaagatctcctgcatggtggatcacgctgggttaaaa
aaacctctcatcgtagactgggatccgtctctgcctgagtctgagaggaataaaatcgcc
atcggagcctctggtctggttctgggagtcatcatcgcagccgctggactcatttactac
aagaagaaatcagcagggagaatcctggtaccaacctaa
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