Puntigrus tetrazona (Sumatra barb): 122352877
Help
Entry
122352877 CDS
T08985
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00280
Valine, leucine and isoleucine degradation
ptet00650
Butanoate metabolism
ptet00900
Terpenoid backbone biosynthesis
ptet01100
Metabolic pathways
ptet03320
PPAR signaling pathway
Module
ptet_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
122352877 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122352877 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122352877 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122352877 (hmgcs1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
122352877 (hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
122352877
NCBI-ProteinID:
XP_043106545
LinkDB
All DBs
Position
10:4001799..4009370
Genome browser
AA seq
525 aa
AA seq
DB search
MIVSPFRMPGSLPAVCEASWPKDVGIVAMEVYVPSQYVEQAELEEYDGVGAGKYTVGLGQ
ARMGFCSDREDINSLCLTVVQRLMERSGLSYQSVGRLEVGTETIIDKSKSTKTVLMQLFE
ESGNTDVEGVDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIHAQWQREGLDKRCGLEDFGFMVFHSPYCKLVQKSLARLMLNDFLCHPSPNTES
GPFGGLEAFRDVKIEDTYFDRDVEKAFMKASTEVFEEKTKASLLISNQNGNMYTPSVYGC
LASVLAQHTPQQLAGQRIGVFSYGSGFAATLYSVKVTQDATPGSSLDKLVSSLCDLQARL
DSRKKVSPDVFAQNMKLREETHHLANYIPQGPVDELFPGTWYLTRVDEKHRRQYARRSMN
DDRPLEAGPVSSSIAPEHIPSPLKKMPRIPTATAGSEVLISNGDH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagtccgttcaggatgcctggatcactccctgctgtttgtgaggcctcgtgg
cccaaggacgtgggcatcgtggccatggaggtgtatgtgccgtctcagtatgtggagcaa
gcggagctggaagagtacgacggagtcggagcggggaaatacaccgtgggactgggccag
gcgcgcatgggattctgctcggaccgcgaggacatcaactctctgtgtctgacggtggtc
cagcggttgatggagcgcagcggcctgtcctaccagagcgtgggccggctggaggtgggc
acggagaccatcatcgacaagtccaagtccaccaagaccgtcctgatgcagctgttcgag
gagtcgggcaacactgacgtggagggagtagacaccactaacgcctgctacggaggaacc
gctgcgcttttcaatgccgtcaactgggtggagtccagctcctgggacggtcgttatgct
ctggtggttgcgggtgacattgccgtttatgcgacgggcagcgccaggccgacgggggga
gccggagctgtggccatgctagtcggacccaacgctcctctggccttcgagagagggctt
cgagggacacatatgcaacacgcgtatgatttttataagccagatatggtgtctgagtat
ccagtggtggacggcaagctttccatccagtgttacctcagtgctttagatcgctgctac
tctgtctacaggaacaagatccatgcccagtggcagagagagggtctcgacaagcgttgc
ggtcttgaagacttcggcttcatggtgtttcactctccttactgtaaactggtgcagaag
tctttggctcgactaatgctcaacgatttcctctgtcatcccagtccaaacacagagagc
gggcccttcggcggactggaagctttcagagatgtgaagatcgaggacacttattttgac
cgagacgtggagaaggcctttatgaaggccagcacggaagtgtttgaggaaaagacgaag
gcgtctctcctcatatcaaaccagaatggtaacatgtacacgccatcggtgtacggctgc
ttggcttcggttctcgcacaacatactcctcagcagttggcaggacagagaatcggtgtg
ttttcgtacggctcgggctttgctgctacgctctactccgtcaaagtcacacaagacgct
acgcctggatcttctctggataagttggtctccagcctgtgtgatttgcaggccaggctg
gattctagaaagaaggtttcgccggatgtttttgcccagaacatgaagctaagagaagaa
acccaccatttagcaaactacatccctcagggcccggtagatgaactcttcccaggaacg
tggtacctcactcgtgtggacgagaagcatcgcaggcagtacgccagacgctcgatgaac
gatgacagaccgctggaggccggaccggtcagttccagcattgcacccgagcatattccc
agtccgctcaagaagatgccccgcatcccgactgccacagctggctctgaggtgctcatt
agtaacggggatcattaa
DBGET
integrated database retrieval system
