Puntigrus tetrazona (Sumatra barb): 122353122
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Entry
122353122 CDS
T08985
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122353122
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122353122
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
FlgK_2nd
Motif
Other DBs
NCBI-GeneID:
122353122
NCBI-ProteinID:
XP_043106973
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Position
10:7305710..7308657
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AA seq
820 aa
AA seq
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MRTQIQRRILLWRALWLLCFAVLWRDTEAQLRYTIPEELKEGSIVGNVAKDLGLDLSEIS
NRKLRIASESGKQYFSLNLRNGELLVNEVIDRETLCGQSASCVLPVQVIIEDPLQFYRVE
VDIQDINDNSPIFLSEINTIEVPELTLTGARFRLEPAQDPDAGTNSLRTYALNKNEHFAM
NIKTDKDGTKVPEIVLEKAVDREKQSVHHLILTGIDGGDPARSGTTQISVKILDANDNAP
VFEHELYEVKVMESTVPGTMILPVKAIDLDDGVNSEVEYSFAAHTPEIIQNLFAINPVTG
ELVVSKPLDYETSTSYKFDIRARDKGSLAMEGHCRVQVTVLDVNDNAPEISITSSPKPVP
EDAAAGTMVALINVKDIDSGVNGNVTLSMSPGTPFKLKPTFSNHYALVTDSQLDREQFPR
YDIELKASDSGSPPLISSKLITVNILDVNDNPPVFSERVYSVYIKENTAPGSILSSVTAS
DRDTGENAKIVYSVLDTNNQGVPVSSYVYINSENGSIFSMHSFDYEKMKVFHIIVIAKDH
GSPSLSSNATVHVFISDRNDNAPAVIYPSTSMGSVSHQRMPRSAKAGHLVTKVTAVDADS
GHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEHDDSSQRLLIEIKDNGEPIQSTTV
TVDIQIEEGVHEPISDYSMKTTENNNKKNGKITLYLIISLGTVSLLSILTLFTLIVKCVR
SSIGSSSCCVRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSE
FSDLTLIKPSSTTNFTDTLNVLDASLPDSAWTFESQQVSA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaatacaaaggaggattttgctctggcgggcgctgtggctcttgtgtttc
gctgttttgtggagagatacagaagcgcagcttcgttatacaatacctgaggagctgaag
gagggatctattgttggaaacgtagcaaaagacctcggtttggatttatctgagatatct
aaccgtaaattacggatagcatcggagtctggtaagcaatatttcagcctgaatttgcgg
aacggcgagctgcttgtgaatgaagtaatagacagagaaaccctgtgcggacaaagcgcg
agttgtgtgttaccagtgcaagtcataatcgaggatccactccagttttatcgtgtcgag
gtggacatacaagacattaacgacaactctccaatattcttgtctgaaataaacacaatt
gaggtgccagaattaacattaacaggagcgaggtttcgtttagagcccgctcaagatcct
gacgctggaacgaactccttgcgcacatacgcgctgaataaaaatgaacatttcgctatg
aacattaaaaccgataaggacggaacaaaagtcccagaaatagttttagagaaagctgtc
gacagagaaaaacagtctgtacaccatctaattttgacaggtattgatggaggtgatccg
gcgaggtctggaactacacagatttctgtaaaaattcttgatgcaaatgataacgctccg
gtgtttgaacacgagttatatgaggttaaagtgatggagagcacagtcccgggtacaatg
atacttcctgtaaaagctattgacttagatgatggtgtaaacagcgaggttgagtattca
tttgcggcacatacaccagaaataattcaaaatttgtttgctattaatcccgtgacaggc
gagttagtcgtttccaagcctctcgattatgaaaccagcacttcatataaatttgatata
cgcgcaagagacaaaggctcgcttgcaatggagggacattgcagagttcaggtgactgtt
ttagatgtgaatgataatgcacctgagatcagcatcacctcctcacccaaacctgtgcca
gaagacgcggccgctgggactatggtagcgttaataaatgttaaagatatcgattcagga
gtaaacgggaacgtaacgcttagcatgtcaccaggcactccttttaaattaaagccaacg
ttttcaaatcattacgcgctggtgacagactcacaattagaccgagaacagtttcctaga
tatgacattgagctcaaagcatcagactctggatcacctccactgatatctagcaaatta
attacagttaatatattagatgtcaatgataaccctcctgttttctctgaacgtgtgtac
tcggtttatattaaagaaaacactgctcccggatccattttatcatcagtaacagcatca
gatcgagacacgggagaaaatgccaaaattgtctattcagttctcgatactaataatcaa
ggcgttcccgtctcttcatatgtttatataaactctgaaaacggtagtatatttagcatg
cactcattcgactacgaaaaaatgaaggtgtttcacatcatcgtgattgctaaagatcat
ggctctccgtctctgagcagcaacgccacagttcacgtgtttatttcggaccggaacgat
aacgcacctgctgtcatttacccgtccacatccatggggtctgtctctcatcagaggatg
ccccgttctgctaaagcaggacatctcgttactaaggtaacagcagtggacgcggactcg
ggtcataacgcctggttgttctacaggctcgcggaggccacggacgcgtctctgttcagt
gttaatttacatacgggagaggtgaggactaaacgcgctgtttcagagcacgacgactcc
tctcagagactgctgatagaaataaaggataacggagaaccgattcagtccaccacagtc
acagtggatatacagatagaggaaggggttcatgagcctatctcggattatagcatgaaa
acgacagaaaacaacaacaagaaaaacggcaaaataactttatatttgatcatttcgttg
ggaacagtgtcacttttatccattttgacattgttcacgttgattgtgaaatgcgttaga
agcagcatcggaagttcaagctgctgcgtcagacgaagcgattgtgaatacaagaacccc
aacagaaacctgcagatccagctcaacactgacgggcccattaagtatgtggaggttctg
ggaggagacatgatgtctcagagtcagtcctttggctcctatctctctccaatgtcagaa
ttcagtgatctcaccctcattaaacccagcagcaccacaaactttacagacacgctaaac
gtgcttgacgcgtcgttaccagacagcgcgtggacgttcgagagccaacaggtgagcgcg
tga
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