Puntigrus tetrazona (Sumatra barb): 122353840
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Entry
122353840 CDS
T08985
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122353840 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122353840 (nthl1)
Enzymes [BR:
ptet01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122353840 (nthl1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122353840 (nthl1)
Prokaryotic type
122353840 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
122353840
NCBI-ProteinID:
XP_043107693
LinkDB
All DBs
Position
1:complement(26476652..26481563)
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AA seq
408 aa
AA seq
DB search
MLAPARSLCIYTFNRLSLRMNSPYFSESIAVLDACATEAMAISNANKGGIRRLRSRMAQG
LRSEDGPPKVKAEVHEQSISFAALETHAKAPAATKVKEETDRAPLTSHSKPRRGHVKVEY
EEEAGLKRQRWEPCDWITQLSFIREMRSKRDAPVDQMGAEKCYDPEAPPEVRRYQVLISL
MLSSQTKDHVTAGAVQRLREHGLTVDAVLEMDDETLGKLIYPVGFWRTKVKYVKRASALI
RQEFRGDVPDTVEGLMRLPGVGPKMAHLAMDIAWGRVSGIGVDTHVHRISNRLGWTKKET
KTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVAPLCSVCLSQHTCPSAHKSLKPA
ARRPGELAARVKEEPSRRRRDTAKQEEEDLRKRSGRKDGAGAQRTEET
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaccggcccggagtttatgtatttatacattcaatcgtttgagtctaagaatg
aactctccatatttcagcgaatcaatagctgtattagacgcttgtgcgactgaagctatg
gcgataagtaatgcaaataaaggaggaattcgcagattaagatccagaatggctcaaggg
ctcagatcagaagatggtcctccaaaagtgaaagcagaagttcacgaacagagcatttca
ttcgctgcactggaaacacatgcaaaagctcctgcagccacaaaagtgaaagaagaaaca
gatcgagcccctttgacgtcacatagtaaaccaaggcggggccatgtgaaggtggagtat
gaggaagaggcggggctaaaaaggcagcgctgggagccgtgtgattggataacacagctg
tcattcatcagggagatgaggagcaagcgggatgctcccgtggaccaaatgggagcggag
aaatgctacgaccccgaggccccacctgaggtgcgtcgctaccaggtgctgatctcctta
atgctgtccagccaaacgaaagatcacgtgacggccggcgctgtgcagagactgcgcgag
cacgggctcaccgtggacgccgtactcgagatggacgacgagactctgggtaaactcatc
taccccgtgggcttctggaggacaaaggtgaagtacgtgaaacgggcctcggctctgatc
cggcaggagttcagaggagacgtccccgacacggtggagggtctgatgcgtctgccgggc
gtgggccctaagatggcccacctggccatggacatcgcctggggccgggtgtcaggcatc
ggcgtggacacccacgttcaccgaatctcaaacagactcggttggaccaagaaggagacc
aagacaccggaggagactcggagagctctcgaggagtggttgccacgagatctgtggagt
gagatcaactggttgctggttggcttcgggcagcaggtgtgtttacccgtggctccgctc
tgctccgtgtgtctcagtcagcacacctgtccctccgcccacaagagcctcaaacccgcc
gctagacgccccggtgaactagcagcgcgggtcaaagaagagccgtctcggaggaggagg
gacacagccaaacaggaagaagaagacctcagaaagagaagcggcaggaaagacggagca
ggagcacagcggacagaagagacttag
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