Puntigrus tetrazona (Sumatra barb): 122356591
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Entry
122356591 CDS
T08985
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04060
Cytokine-cytokine receptor interaction
ptet04672
Intestinal immune network for IgA production
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122356591 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122356591 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122356591 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122356591 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122356591 (cxcl12a)
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
Chemokines
122356591 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Chemokines
122356591 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
122356591
NCBI-ProteinID:
XP_043111414
LinkDB
All DBs
Position
13:11255594..11261837
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AA seq
99 aa
AA seq
DB search
MDLKVIVIFALMAVVIHAPVSNAKPISLVERCWCRSTVNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNKEVCINPETKWLQQYLRNAMNKMKKAQQQQS
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaagtgatcgtaatattcgctctgatggcggtcgtcattcacgcacccgtt
tcaaatgccaagcccatcagcttggtagaaagatgctggtgccgttccacagtcaacaca
gtcccacagagaagcattcgcgagctcaagttcctccacacaccgaactgccccttccaa
gtcattgccaaactgaagaacaacaaggaggtgtgcattaacccagagaccaaatggctg
caacagtacctaaggaacgccatgaacaaaatgaaaaaagcccaacaacagcagagctaa
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