Puntigrus tetrazona (Sumatra barb): 122356936
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Entry
122356936 CDS
T08985
Symbol
c9orf72
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122356936 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356936 (c9orf72)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
122356936 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
122356936
NCBI-ProteinID:
XP_043111988
LinkDB
All DBs
Position
13:complement(5861797..5868340)
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AA seq
502 aa
AA seq
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MLIKLHGRSVTAGGCCNLFVTTDFCIVRPTRVTRSVRAAVMSAACPPQSPGVAKTEVLVE
DWCPVLAATFAYWDNILGPRVQHIWAPRGQGLSLLSDGEVTFLANHTLNGEILRSAESGA
VDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQSELSFYLPLHSVCVERLKHII
RKGRICMQKGYNIIPVLSSEIVPIMELLTSMKKHSVPEEVDLKDTVLNDDDIGDSCHEDF
LHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAERKCSRLCHPDGSFKYDTGLF
VQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDMXAVKQMPPCHEHTYHQRRYMRAELSAL
WKAASEDDISSDNLINAQDSYTPDLNIFQDVMHKDTLVKSFIDEVFLLKPGLSLRSVYLS
HFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDLTVEGDLNIIMAMAEKLRAGL
HSFVFGKSFLTSVQERDLLINF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcttattaaattgcatgggcgcagtgtaacagcagggggatgttgcaatctgtttgtc
accactgacttctgcattgtgagaccgactagagtgactaggtctgtgagagcggccgtc
atgtctgcagcctgtcccccgcagtctcccggcgtggctaagactgaagtgctggtcgag
gactggtgtcccgtgttggccgcgaccttcgcttactgggacaacatcctgggacctcgt
gtacagcacatctgggcccccagaggtcaggggttgtcgctgctcagcgacggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgcgtagcgcggagagcggcgca
gtggatgtgaagttcttcgtcttggcagaaaagggagtcatcatagtctcgctgattttt
gacggagaactcaagggcgacaagaacacttgcgctctgtcgatcatcctgccgcagtcc
gagctaagcttttacctgccgctgcacagcgtgtgtgtggagagactcaagcacatcatc
cgcaagggacgcatctgcatgcagaagggctacaacataattcctgtgttgtcgtcggag
attgttcccataatggagcttctcacgtccatgaagaaacacagtgtgccagaggaagtg
gatctaaaggacaccgtgctcaatgatgatgatattggagacagctgtcacgaagacttt
ttacacaaggctatcagctctcatcttcagacctgcggctgttcaatggtggttggcagt
aatcctgagaaagtcaataagatcgtgctcacgctgtgcctcttcctcactcctgcagag
agaaagtgctctcgactgtgtcaccccgacggctcctttaaatatgacaccggcctcttt
gttcaaggcctccttaaggactccacaggcagcttcgtgctgccctaccggcaggtgctc
tactccccgtaccccaccacccacatcgacgtggacatgnctgcggtcaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgttacatgcgagccgagctcagcgccctc
tggaaggccgccagcgaggatgacatcagctctgacaacctcatcaatgcccaggactca
tacacaccagacttgaatatatttcaagacgtgatgcacaaagacacacttgtgaagtct
ttcatagatgaggtgtttcttttgaaaccaggtctgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacagaaaggccctgacactgctcagatatattgaggatgag
acgcagaagggtaaaaaacctttcagatctctacgcaacttgaaaactgatttggattta
acagtggagggcgacctgaatatcatcatggcgatggcggaaaagctgcgggcaggcctt
cactcctttgtttttgggaagtctttccttaccagtgtgcaggaacgtgacctcctcatt
aacttctga
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