Puntigrus tetrazona (Sumatra barb): 122357618
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Entry
122357618 CDS
T08985
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
ptet04510
Focal adhesion
ptet04540
Gap junction
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122357618 (pdgfrb)
04020 Calcium signaling pathway
122357618 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122357618 (pdgfrb)
04540 Gap junction
122357618 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122357618 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ptet01001
]
122357618 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ptet04090
]
122357618 (pdgfrb)
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122357618 (pdgfrb)
Protein kinases [BR:
ptet01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122357618 (pdgfrb)
CD molecules [BR:
ptet04090
]
Proteins
122357618 (pdgfrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
RIFIN
EcsB
Motif
Other DBs
NCBI-GeneID:
122357618
NCBI-ProteinID:
XP_043112979
LinkDB
All DBs
Position
14:complement(8648018..8688497)
Genome browser
AA seq
1069 aa
AA seq
DB search
MKSFSRSLLTAMTTGLLLFCLGSSGLELSPSDPQVVLPIDSSFNITCSGLSEVTWRFRRE
ERLSEFHVEKRSSSSSVLSLERVTWRHTGVYVCSENGTDETREVAVFVPDPEVWFLENDH
IMVTKTREEGTIPCLVTNPLINVTLYEKDTEVMVEGSYNPIVGFTAALEDRNYKCKGELN
GEEKESIGFYVFSIVAPEALDPYINASKTVLKQGETLNVNCTVHGAELVFFSWDFPHKDV
GDVEPLTDVLSSMSMRSCLNITDVTLARSGQYVCHVHEGVEDQRASASINITVLEKGFVA
LSSHLDRNISAQLGENVELKVEVEAYPKPSIQWSKDGAAIRGHSTRQEQETRFISTLTLV
RIRLEQMGLYTVTVQNQDDSKEITFDLEVKVPPQITELSDHQLPGKKHAVTCVAEGVPSP
SIQWFSCDSMHKCSNRSVVWSPLAEDPEKVSIQTNVSYNISRKIHLVHSQLTLLRPQLLS
IRCEARNERGARSRDIRLVNSTLFSQVAVLATVLALVVIVIISIIILIAVWRKKPRYEIR
WKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYGLGRS
QSTTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKHGPLYLVTEYCR
YGDLVDYLHRNKHSFLQYYADKNHIANGSQICNDSDVPPGKEYVSFGSECDGGYMDMTKD
EQTEYVAMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPVLSYTDLVG
FSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGSTFL
PLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMTK
PSYASDDVYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSDHPAV
ARGKPCVPSPFPNTFSPQSLSSNPGPDLSPRPGADGESTDAPHNEYIIPIPDPKPEEHSQ
DGPVLMEIPSSSLSSDEETVSMETPSTEPEREELLPDHSGSLEVEESFL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcagccggtccctactgactgccatgacaacaggtttgctcctgttctgt
ctgggtagctcaggtctagagctcagtcccagcgaccctcaggtcgtcctccccatcgac
tcctccttcaacatcacctgctccggcttgagtgaggtcacctggcgcttcagacgagag
gagaggctttcggagttccacgtcgagaagcgaagctcctcctccagcgttctgagtctg
gagcgggtgacctggagacacacgggtgtttacgtgtgctcagagaacgggacagatgag
acgagagaggtggccgtctttgtgcctgatcctgaggtctggttcctcgagaacgatcat
ataatggtgactaagacaagagaagaaggcacgatcccatgtctggtgaccaatccactg
ataaacgtcacgctgtatgagaaagacacggaggtaatggtggagggttcatataacccc
atcgtaggtttcaccgccgctctggaggacagaaactacaaatgtaaaggagagctgaac
ggagaggagaaagagtccattggcttctacgtcttcagtatagttgctcccgaggctctg
gatccttacatcaacgcctccaaaacagtcctgaagcagggcgagacgctgaacgtcaac
tgcactgttcacggcgcagagctcgtcttcttctcctgggactttccccacaaagacgtg
ggggacgttgagcccttgaccgatgtcctgtcgtccatgagcatgcggtcctgtctcaac
atcacagacgtgactctggccagatcaggacagtatgtttgtcacgtgcatgagggtgtg
gaggaccagagagcttcagccagtattaacatcactgtactggagaaaggcttcgtggct
ctttcttcacatctggacaggaatatctcagcgcagctcggagagaacgtggagctgaaa
gtggaggtggaggcgtatcccaaacccagcatccagtggagtaaagacggcgccgccatc
agaggacacagcaccagacaggaacaggagacccggtttatcagcacactgaccctggtc
aggatccggctggagcagatgggtctctacaccgtcactgtccaaaaccaagatgactct
aaagagatcacctttgacctggaggtgaaagttcctcctcagataaccgagctgtctgac
catcagctgccgggtaagaagcacgcggtcacttgtgtggcggagggagtaccgtctccc
agcattcaatggttcagctgtgacagcatgcacaagtgcagtaacagaagtgtggtgtgg
agccctctggcggaggatcctgagaaggtcagcatccagaccaacgtcagctacaacatc
tcacgcaagatccacctggtgcacagtcagctgactcttctgagaccgcagctgctcagc
atccgctgcgaggcccgcaacgagagaggagctcgatcccgggacatccgcctggtcaac
agcactttgttttctcaggtggccgttctggccacggtcttggcgttggtggtcatcgtc
atcatctccatcatcatcctcatcgctgtgtggaggaagaagccacgctatgaaatcagg
tggaaggtgatcgaatcggtcagtttggatggacacgagtacatctacgtggaccccatc
cacctgccctatgacctggcctgggagatgccacgggacagcctggtgctgggtcgcacg
ctgggatctggagcgttcgggcgagttgtcgaggcaacggcgtacggtctcggccgttca
caatccaccactaaagtagcagtgaaaatgctgaaatcgacggctcggaggagcgagacc
caagctctgatgtctgaactcaagatcatgagtcatctgggtcctcacctcaacatcgtc
aacctgctgggcgcctgcaccaaacacggtcctctgtatctggtgaccgaatactgtcgc
tatggagatctggtggactatctgcacaggaacaagcacagcttcctccagtactacgcc
gacaagaaccacatcgccaacggcagccagatctgtaacgacagcgatgtgccgcccggg
aaagaatacgtgtcgttcggcagcgagtgtgacggaggatacatggacatgaccaaagac
gagcaaaccgaatatgtggcgatgcaggagctcacggacaccatcaagtatgcagatatc
cagccttcgccctacgagtctccttaccaacaagacatctaccaagagcaaggtcacaga
gtagatcggtctctggtcatcagtgattctccggtcctgagctacactgatctcgtggga
ttcagttatcaggtggccaaaggcatggagttcctggcctcaaaaaattgtgtgcatcgg
gatctggcagcgaggaacgtcttgatctgtgaaggcaaactggccaagatctgtgacttt
ggcctggccagagacatcatgcatgacaacaactacatctccaaaggcagcacgtttctt
cctttgaagtggatggcaccggagagcatctttcataacctgtacaccacgctgagtgac
gtctggtcctacggcatcttactgtgggagatcttcactctgggaggaaccccgtatcca
gacctgcccatgaacgagctgttttacagcgctctgaagagaggataccgcatgaccaaa
ccatcgtacgcctccgacgacgtttacgaggtcatgaggaaatgttgggatgagaagttc
gagaagcgtcctgagttctcctttctggtgcacaccatggggaacatgctgtcagacgga
tataaaaagaaatactctcaggtcagtgatagttttctgaagagcgatcaccccgcggtg
gcccgagggaagccgtgtgtcccgtctccgttccccaacaccttctctcctcagtccctg
tcctccaatccgggcccagacctgagcccacggcccggagctgacggagagagcaccgac
gctccgcacaatgagtacatcatccccatccccgatcccaaacccgaggagcactctcag
gacgggccggtgctgatggaaatcccctcgagctcgttaagttctgatgaggagacggtc
tccatggaaaccccgagcaccgaacccgagcgcgaggagctgctgccggatcattctgga
agtctggaggtggaggagagcttcctgtga
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