Puntigrus tetrazona (Sumatra barb): 122358980
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Entry
122358980 CDS
T08985
Symbol
nlrp1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122358980 (nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122358980 (nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122358980 (nlrp1)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122358980 (nlrp1)
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122358980 (nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
FISNA
AAA_25
NOD2_WH
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122358980
NCBI-ProteinID:
XP_043114939
LinkDB
All DBs
Position
2:21818882..21827232
Genome browser
AA seq
1272 aa
AA seq
DB search
MKKEKQGPCYVLSEDRWTEKPRKSQDSKIKGEAYIRCMAASCDVIDFDKFELQSLTNVQL
KHDIGSEVMPISRREQSNMVRQYKSSVIDRFKFVTEYNLPSDELVDLAARYTEPMIIQRS
KDQTEKYYQENVRSVDALSHLLSNDKSHSVRIDQLFSPDCDGNRPKTVILSGDSGRGKSF
MLQKIMLDWASGELYSENFDAVFLLKCEELKCVSEEMSLFELLSWGCSLTSDQILQILQF
TPEKVLILIDGMDEYISCPPIHFLLLHTNPFKRAPPMVILRNLFRRFLLPESFMLVTTRS
VAANALMNLLKSPQRFTEIMGFSERGVQKYFQKFFQDEQLFRKTYDSVKTNESLLTACSV
PFLCWMVCACLKKHVTDDDHVMKELKTTTSIYVHFVSTLLDHHHDQSLSVLTMLRSLGQL
AEEGKKNRLVFFDYKDVAKTGLDPATVLFLYKDDFRGKKTRPIFKFIHFSFQEFFAALYC
VLLDEEEPWWKLSERFILMDSEAIIYRSSPISRLRLSNTIPSVMMFLCGFLNKKTTSSIF
ETIKWTVPQITKLKKRQLKKKLAKRIPAMTRQYELELFALHCLYELQDERFVREALNKHR
FMNLSNISLRSTDCRVLLYCLQCCPHIRDLNLMNCDLTAEKLKILQPALCMCKTLRLSVD
HLSEVGNLIRIVGEGKILRELQVQEDEYSPESPRWSLNLSVSGGDVSLSLSSSEKNPXFP
AVLNISLTCPQSEISNTDWTLFLQRLSRAGKVAEDSSALDEHISLLLSSFHSVGLKTFDL
KLVSLNKNWASGITSLIQTCTSLHKLSVNVTGLLLEEGLILLKKSLEDPHCAVNIEGWKC
SKPTDQCKGQDWSQSCNDKVEIHFKPKVLGKLRELNISEPSAMNLYCQSCIHIVDSDQWV
QVEPSVCTDEGGSEFRISTPAGRFECSRTRMRWVCAGDVTLQYRAVDGGFLRAELERLRC
ERIGPVIDVTVISGKLEEAHLPHYACLAESDPSLRDDVKVLSVEEEGISLESVELTRFHA
KLIQPYFSPKTVLMKLGLPVKVHCDLLIFMTQKNPIILHVYFFPSDSLFKEKIKTEEKCC
HQIKCSRPETPLQMMKQHSLEVPGASVQPEEIKLRGDVDPNFFQVKHPVVDDIKMSLSRV
DDQKSVWTATIWKELINIHPNRTEALFVTRQNQNTPQLAVSFDKVQFFDRNWCALIKSVE
NVNKIADKLLQKQIIHEELYSAITRPTSTSEASMRKICSVVRKGSDTVKEMFISILLKEV
PDLLNHLPLPDS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaaacaaggtccttgttacgtgttatctgaagacaggtggactgagaaa
ccgaggaaatctcaagattcaaagataaaaggagaagcttacatcagatgcatggctgct
tcttgtgatgtcattgactttgacaaatttgagttacaaagtttaacaaatgttcaactc
aaacatgacataggaagtgaggtgatgccaataagcagaagagagcagagcaacatggtc
cgtcagtacaagtcttcagttattgacaggtttaagtttgtaacagagtataatcttcca
tctgatgaacttgtggatctggccgcccgatatactgagccaatgatcattcagaggagc
aaagatcaaactgagaaatactatcaggagaatgtgaggtctgtggatgctttatctcat
ctgttatcaaatgacaagagtcacagcgtcagaatagaccagctgttcagtcctgactgt
gatggaaacagaccaaaaactgtgattctcagtggagattctggaagagggaaatccttc
atgttacagaagatcatgttggactgggcttctggagagctctactctgaaaactttgat
gcagtttttcttctgaaatgtgaagagctgaaatgtgtttctgaagagatgagcttattt
gagctcttgagctggggttgcagtttaacatcagatcagatcttacagatattacagttt
acaccagagaaagtcctcatcctcattgatggaatggatgagtatatatcttgtccaccc
attcacttcttgttactacacactaatccattcaagagagcgccacctatggtcattctt
aggaacttgtttagaagattcttgctgcctgagtcattcatgcttgtcaccacaagatct
gtagctgctaatgcgctgatgaatctcctcaagagtcctcagcgtttcactgagattatg
ggcttctctgagagaggagtgcagaagtacttccagaagttctttcaggatgagcagctc
ttcaggaaaacatacgatagcgtgaagactaatgaaagcctcctgactgcctgctctgtg
ccttttctgtgttggatggtctgtgcttgtctgaagaaacacgttacagatgatgatcat
gtaatgaaagaactaaagacaaccacctccatatatgtacactttgtgtccactctactg
gatcatcatcatgaccagagtctgtctgtcctcaccatgctgaggagtctgggtcaactg
gcagaggaagggaagaagaaccgtctggtgttttttgattataaggatgtagccaagact
ggtttagatccagctactgttttgttcttgtataaagatgatttcagaggcaaaaaaacc
agaccaattttcaagtttatccatttcagctttcaggagttctttgctgcgctttattgt
gttttgctggatgaggaagagccctggtggaaactcagtgagcggtttatcctgatggat
tcagaagctataatttacaggtcgtctcctatttcgagacttagactatcaaataccatc
ccttcagtcatgatgtttctctgtggttttttaaataagaagacgacaagctcaatcttt
gaaacgatcaagtggactgttcctcaaatcaccaaactgaaaaaaaggcaactaaagaaa
aagctggcaaaacggattcctgcaatgacacggcagtatgaattagagttatttgctctc
cactgtctgtatgagctccaggatgaaagatttgtcagggaagctttgaacaaacacagg
ttcatgaacctgtctaacatttctctgaggagcacagactgtcgtgtgctgctgtactgt
cttcagtgctgtccacacatcagagacctgaacctcatgaactgtgatttaacagctgag
aaactcaagattcttcagccagcactctgtatgtgtaagactctaaggttgtcagtagat
catctgtcagaagttggaaatttgatccggattgttggtgaaggaaaaatcttgcgagag
ctacaagttcaggaggatgaatacagtcctgagagtcccagatggtcacttaacctttca
gtctctggtggagatgtctccttgtctttgagctcatctgagaagaatccataatttcca
gcagtattaaacatcagtcttacatgtccacaatcagagatatccaacactgactggaca
ctcttcttacagagactcagcagggcaggaaaagttgcagaagactcttcagctcttgat
gagcatatcagtttgctgctgtcctcttttcactctgtgggtttgaagacgtttgacctg
aagctggtcagtctgaataaaaactgggcttctgggatcacttccctcatccagacctgc
accagtctacacaagctcagtgtcaatgtcaccggattgcttttggaggagggactcatt
ttactgaagaaatcactggaagatccacactgcgctgtgaacattgaagggtggaaatgc
agtaaacccactgaccagtgcaaaggacaggactggagtcagagctgtaatgacaaagtg
gagattcacttcaaaccaaaggttttgggaaagctgagagaattgaacatctctgaacca
tctgccatgaatctttattgtcagtcttgtattcacattgttgactctgatcagtgggtt
caagtggagccgtcagtctgtacagatgaaggaggctcagagttcaggatcagcactccg
gcgggtcgattcgagtgcagcaggaccagaatgcgatgggtctgtgctggtgacgtcact
ctccagtaccgtgcagtggatggaggtttcctcagagcagagctggagaggcttcggtgt
gagagaatcggtcctgtgattgatgtgacggtgatctcagggaaactggaggaggcccat
ctgcctcattatgcctgtttagcagagtcggatccttccctcagagatgatgtaaaggtc
ctcagtgttgaagaagaaggaatatctttggaatcggtggagttgactcgttttcatgcc
aaattaatccagccatatttttctcctaaaacggtgcttatgaaattagggttaccagtg
aaagtgcactgtgatctactgatcttcatgacacaaaagaaccccatcattctccatgtg
tattttttcccatctgattcactttttaaagaaaagattaaaacagaagaaaaatgttgt
catcaaattaaatgttcgagacctgaaaccccactgcagatgatgaaacaacacagtctt
gaggttcctggtgcttctgtccaacctgaagagatcaaactaagaggagacgtcgatcca
aacttctttcaggtgaaacatcctgtggtcgatgacatcaaaatgtctctcagtcgagtg
gatgatcagaaatcagtttggactgcaacaatttggaaagaattaatcaacattcaccca
aacaggactgaggccttgtttgtaacgcgacaaaaccaaaatacaccacaattagctgtc
agctttgataaagttcagttttttgatagaaactggtgtgctcttattaaaagtgttgag
aatgtgaataaaattgcagacaaactgcttcagaagcaaatcattcatgaagaattatat
tctgcaatcacacgtcctacttcaaccagtgaagccagcatgaggaagatctgtagcgta
gtgcgtaaaggtagtgacactgtgaaagaaatgttcatctccattcttctgaaagaagtt
cccgaccttttaaatcatcttcctttacctgactcttaa
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integrated database retrieval system
