Puntigrus tetrazona (Sumatra barb): 122359595
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Entry
122359595 CDS
T08985
Symbol
nphs1
Name
(RefSeq) nephrin isoform X1
KO
K24496
nephron
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122359595 (nphs1)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122359595 (nphs1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set_2
ig
Ig_2
V-set
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
NDNF
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
122359595
NCBI-ProteinID:
XP_043115903
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All DBs
Position
15:complement(19797838..19872160)
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AA seq
1240 aa
AA seq
DB search
MGFWFSLLLASAWVFLRMELRGVCGQQAFKTEPRNVTVRAGATALLKCEVLRASGAVQWV
KDGLLLGPQRSLPGYPRYSMTGDQQKGQYHIQIVDVSLEDDGPYECQVGRSVSSRAIVSR
TSWLNVQIPPSQPYIQLESDEPWVEGDEYTVTCIAPDAKPPAEITMFRDGEELTETSSFT
MSGSQDKLQNTHAEVVIRARSSDNARQLTCRAKNPASPRVLETHVTMSVYFPPQAPVIMG
LENEELKAGSFVRVVCMSYGGNPLATLHWTKNGEVLSTSWEEDIVSRHSSSVLKMVVKPE
DNHAVLRCESVNQVSTSPMSLTRSLTVLFEPTEITLLGSFEATEGEEINLSCYTSSSNPP
VHIRWWLGFKELNRTNVTISEGYNGGMMTVSNLTHKVSREDNGLSLTCEAFNKGTRFSGV
RSEELIVYYPPQKVWLDAPPPNVFLHSGSVLRLVCFSSGGNPTGQLVWLKNNKVVQTASK
QVSSERGVSRELLLILQPSDNLATYRCDSSNKAKKVLSTQTKLRVLFPAISVKIVAKQQE
LRSGQMLDLDCLAGSSNPTANISWSLGPTILKGVDQAPKKAEFGGMSRTSKLSLALDSHH
WKKRITCHVFSNVLSEGVNNFYTLNVLFPPEFSDEQPDEVQVTEDETATLPAKVLGNPDE
ITCEWIFQGEKLLKERDPRYHFDDWTLEIVNVSRRDGGDYIIECSNAEGKNRTKLKLDVQ
YAPTVHMKSDPVYVNLGDTADLLCVADANPITYSMFSWKWMGEGEVDDLGEQSEDEGTGL
LTIYKVTREQAGLYECTADNGISPPGSVEGQLIVRFAPELQKGPQWRKVASRGDGSNDAN
VVCQAQGVPRVHFIWTKNAFPLDLGNPRYEEKTEVTGTVHNSILTVINVSAALDYAIFTC
TARNSMGEDSLDIQLLSTNHPDPPSDLKLLRVDQNAVTLEWMPGFDGGLTQNFRVRYRWA
GSVSFMYVDVFPPTATVYTVTGLNPSTTYNFSVNAINTMGESSYADSNKILTVTTADAKE
AVDGVSPADPDSALAGRGLPVYVVVILVVGGLLLLLNPLSCFLLAKWKRGRSLKEDTGSV
SQETKSEEQRSTASGSTRYASRELINASAQRTLLIDSSSEPDSSVYESYGRQESTHYYYP
TEVYSPALFTHLEGPEDHDGRHDTNPLAHDYEEVRGCGTYEDLQGYSLLPPAAQLHPRAP
VSSFYEGRAYGKADVDVYDSMVYRRRRDTDLPFELRGELV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctggttttcgctcctcctcgcaagtgcttgggtttttcttcggatggagtta
cgaggtgtgtgtgggcagcaggcattcaagacagagccacgtaatgtgacggtcagggcg
ggggccacagctctgctgaagtgtgaagtgctgagggcctcaggggccgtgcagtgggtt
aaagacgggctgctcctgggacctcagagatcgctgcctggctacccacgctacagcatg
acaggagaccagcagaaaggccagtaccatattcagattgtcgatgtgagcttagaagac
gacggcccctacgagtgccaagtgggccgctctgtgagcagtcgcgccatcgtgtcccgt
acatcctggctcaatgtgcagatcccgccctcacagccgtacatccagctggagtctgat
gagccgtgggtggagggagacgaatacacggtgacctgcatcgctcctgatgcaaaacct
cctgcggaaatcaccatgttcagagatggagaggagctgacggaaaccagttctttcaca
atgtcaggctcacaggataaacttcagaacactcacgctgaagtcgtcatcagggcacga
agttcagacaacgcacggcagctgacgtgtcgagcgaagaacccagcctcccctcgggtc
ctcgagactcacgtgaccatgagtgtatactttcccccgcaggctcctgtgatcatggga
ttagaaaatgaagagctcaaagctggttcctttgtcagggtggtgtgcatgtcatacggg
ggcaacccgctggccactctgcattggactaagaacggagaggtcctgtctactagctgg
gaggaggacattgtgtcacgtcactccagtagtgtgttgaaaatggtggtaaagccagag
gacaatcatgctgtgctgcggtgcgagagcgtcaaccaagtgtctacttcaccgatgtcc
ctcacacgttctctcactgtcctttttgagccaaccgagataacgttactgggttcattt
gaagccacagagggagaggagatcaatctgtcctgttacacttcctctagtaatcctccg
gtccacattcgctggtggcttgggttcaaggagctcaacagaacgaatgttaccatctct
gaggggtataatggtggaatgatgacagtgtctaacttaacacataaagtctcacgtgag
gacaatggtctttctctcacttgcgaggcgttcaacaaaggcacccgcttctctggcgtt
cggtctgaagagctcattgtttactatcctcctcagaaggtgtggttagatgctcctcca
ccaaatgttttcttgcactctggttcagttcttcgtttggtctgtttctccagtggtggg
aatcccacaggtcagctggtctggttgaagaacaataaagtcgtgcagaccgcatctaag
caggtgtcttcagagcgtggtgtgtcacgagagctgcttctcatcctccagcccagcgac
aatctggccacctaccgctgtgactcctccaacaaagccaagaaagttctgtccacccaa
accaaactcagggttctgtttccagcaataagcgtgaagatcgtggccaagcagcaggag
ctacgcagtggtcagatgctggacctggactgcctggccggaagcagcaatcccactgca
aatatcagctggagtctgggccccaccattctgaagggagttgaccaggctcctaaaaag
gcagaatttggtgggatgtcccgaaccagtaagctgtccctcgctcttgactcccatcac
tggaagaaaaggatcacctgtcatgttttcagcaatgtgctgtctgagggtgtcaacaac
ttctacactctcaatgtgctctttcctccggagttttcggatgagcagcccgatgaggtc
caggtcaccgaggatgaaacggccacgcttcccgccaaagtcttgggcaatccggacgaa
atcacctgcgagtggatttttcagggcgagaagctgttgaaagaaagagatcctcgttat
cacttcgacgactggaccctggaaatcgtcaacgtttctcggcgagacgggggcgattac
atcattgagtgttccaatgctgaggggaagaaccgcacaaagctcaagctggatgtacag
tatgcccctactgttcatatgaagtctgatcccgtgtacgtgaacttgggagacacggct
gacttactgtgtgtcgctgacgccaaccccatcacctacagtatgttttcctggaagtgg
atgggtgaaggggaagtggatgatctgggagagcagagtgaagatgaaggcaccggtttg
ttaactatatacaaggtgactcgtgagcaggcaggtctttacgagtgtactgcagacaat
ggcatatctcctcctggaagcgtggaaggacagctcatcgtacgctttgctccagagctt
cagaaggggccgcagtggaggaaggtggccagccggggggacggcagcaatgatgcaaat
gtagtttgtcaggcacaaggtgttcctcgtgtccacttcatctggacaaaaaatgcattt
cctttagaccttggcaaccccaggtatgaggagaagacggaggtgacaggaaccgtccac
aacagcattctgaccgttataaacgtgagcgcagctttggactacgccatcttcacctgc
accgcccgcaacagcatgggagaggactctctagacatccagctcctcagcaccaaccac
cccgatcccccatcagacctgaagctgctccgtgtcgaccaaaacgccgtcactctggaa
tggatgcccggatttgatggtggtttgacacaaaacttccgtgtcaggtaccggtgggcg
ggatcagtgagtttcatgtacgtggacgtgtttcctccgacggccactgtttatacagtc
acaggcctcaacccttccaccacgtacaacttttcggtcaacgctatcaatacaatggga
gagagcagctatgcagacagcaacaaaatactgacggtcaccactgccgatgcgaaggaa
gcggttgatggggtctccccagcagacccggactcggctcttgcaggtcgcggtcttcct
gtctacgtggtggtgatcctggttgtgggtggtcttctattgttgctaaaccctctgagc
tgctttctattggccaaatggaaaagggggcggagcctgaaagaggacacagggagcgtt
tcgcaggagaccaaaagcgaggagcagaggtccacagcgagcggctcaacacgctatgcg
agcagagagcttatcaacgcctcggcacagcgaacgctcctcatcgacagcagctctgag
cctgacagcagcgtctatgagagctacggacggcaggagagtactcattattactaccca
acagaggtatacagtcctgccctgttcactcacctcgaaggccctgaggatcatgatggc
agacacgacacgaaccctctcgctcacgactatgaggaggtgagaggctgcgggacctac
gaggacctgcagggctactcactgctgccccctgctgcccaacttcatccacgagcccca
gtatccagcttctacgagggaagagcgtacggtaaagccgatgtggacgtttatgattct
atggtgtacagacgcagaagagacacagacttgccatttgagctcagaggggagctggtt
taa
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