Puntigrus tetrazona (Sumatra barb): 122361489
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Entry
122361489 CDS
T08985
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04620
Toll-like receptor signaling pathway
ptet04621
NOD-like receptor signaling pathway
ptet04622
RIG-I-like receptor signaling pathway
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122361489 (traf3)
04621 NOD-like receptor signaling pathway
122361489 (traf3)
04622 RIG-I-like receptor signaling pathway
122361489 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122361489 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Crescentin
zf-C3HC4_2
Sina_ZnF
EzrA
zf-rbx1
zf-TRAF_2
zf-RING_4
Exonuc_VII_L
ATG16
Motif
Other DBs
NCBI-GeneID:
122361489
NCBI-ProteinID:
XP_043118196
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All DBs
Position
17:complement(11073443..11086611)
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AA seq
573 aa
AA seq
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MSAGRNVEQQIALQQRPPSLAMPSMAQRPRPEPGILPLHGGFRDHFVTTPEAKYRCESCR
LVLCIPRQTECGHRFCETCITELLSKPNPVCPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQQVMDHLEVCQYFEVPCPLGKCKEKMMRKDMSEHLSLKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CSFKGLNQEMREHESSCAPEHLKMMVARNTTLEAKVEDIKGELMERYKVLPSLSSRLAEV
ETQYEEMREKHRQLEQKLVSMQMLMSAHSEKLLEVEMELRELRPLRAMREEVEALRGSVE
SMRSIVSSLDSGRVGSSSGSHTLGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctc
gctatgccctccatggcccagcggcccaggcccgagccaggcatcttgcccctgcacggc
ggatttagggaccactttgtcacgacgcctgaggccaagtaccgctgcgagtcttgcaga
cttgtgctctgtatccctcggcaaaccgagtgtggacatcgtttctgcgagacctgcatc
acagagctgctcagtaagcctaacccagtttgtccagccgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaaggtctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccacttg
gaagtttgtcaatacttcgaggtgccgtgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgtctgagcacttaagcctcaaatgcaaacaccgagagatcacctgtgaa
ttctgcaatcacaagatggccctcaccgagttacagaaacacaaagacacagtttgtcct
gcatttcctgtagcatgccctaatcactgctcgttttcttccattctgagaagtgagctg
tccagtcatcagcatgactgtccaaaggcccaagtgacatgctcttttattcgctacgga
tgctcctttaaggggctgaatcaagagatgagggaacacgagtccagttgtgcgcctgag
cacctgaaaatgatggtggccagaaacaccacattagaggccaaggtagaggatattaag
ggcgagctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgctgaggtc
gagactcagtatgaggagatgagagaaaagcacaggcagctggagcagaagctagtcagc
atgcagatgctgatgagcgctcactcagagaaactgcttgaggtcgagatggagctgcgg
gagctccgtccgctgcgagctatgagagaggaggtggaggctctgagagggtccgtggaa
agcatgcgctccattgtatcttctctcgattcgggccgtgtcggttccagttctggttct
cacacgctgggctccttagagcagcagctctcgcgtcacgatgacatgatgagcgtccat
gacatccgcctggctgagatggacctgaagctgcaggtgctagagacggccagcttcaac
ggtacgctcatttggaagatccgtgactacaaaagacggaaacaggaagccgtggcctcg
aaaaccctttcgctctacagccagcctttctacacgggctatttcggctataagatgtgt
gcccgcgtctatctgaatggggacggaatgggtaaaggcacgcatctctcgctgttcttc
gttgtcatgcgcggcgaatacgacgccttgctgccgtggccattcaaacagaaagtaacg
ttaatgctaatggaccaggggccggcaaggaaacacttaggcgatgccttcaaaccggac
ccaaatagcagtagctttcgccggcccactggtgaaatgaacatcgcctcgggctgtccg
ctctttgtggctcagactgtcttagagaacgggacctacatcaaagacgacaccatcttc
attaaagtgactgtagacacttccgacctcccggacccttga
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