KEGG   Puntigrus tetrazona (Sumatra barb): 122361917
Entry
122361917         CDS       T08985                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122361917 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptet03041]
    122361917 (smndc1)
Spliceosome [BR:ptet03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122361917 (smndc1)
 Complex B
    122361917 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122361917 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730 T3SS_needle_F
Other DBs
NCBI-GeneID: 122361917
NCBI-ProteinID: XP_043119055
LinkDB
Position
17:6736921..6740317
AA seq 239 aa
MSEELVKQLSNYKAQLQQVEAALSTDPDNEDLLKLQKDLQEVIELTKDLLTSQPVESATS
TKSSEAVPPSRSWRVGDHCMATWTHDGQVYEAEIEEVDNENGTAAVTFAGYGNAEVLPLH
VLKPVEEGRSSSREDDGGKPKSKKELLAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQ
QFNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggtaaagcagttgagcaattataaagctcagctgcagcaggtggaa
gcggcgctctctacagatccagataatgaagatctgcttaagctgcagaaggacctccag
gaggtgatcgagttgacaaaagacctgttgacatcacagccggttgagagtgcaaccagc
accaaaagctcagaggcagtccctcccagtcgcagctggagagtcggagaccattgcatg
gccacctggacccacgacggacaggtttatgaagcggaaatcgaagaggttgacaatgag
aacggcacggcagctgtcaccttcgctggctacggcaatgcagaggtgttgccgcttcat
gtgctcaaaccagtggaggaaggcaggagcagcagcagagaagatgatgggggaaagccc
aaatctaagaaagagctgttggcagagcagagggaatataagaagaaaaaggcacagaaa
aaggtgcagcgcatgaaggagctggagcaggagagagaagatcagaaatccaaatggcag
cagtttaacaataaagcttattccaagaataaaaaaggacaggtgaagaggagtatattt
gcatctccagagagtgtgaatggaaaggttggcgtcggcacgtgtggtatcgcagataaa
cccatgacccagtacaatgacacttcaaaatataacgtcaggcacctaatgcctcagtga

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