Puntigrus tetrazona (Sumatra barb): 122361933
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Entry
122361933 CDS
T08985
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122361933 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122361933 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122361933 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
122361933
NCBI-ProteinID:
XP_043119081
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All DBs
Position
17:8000013..8067058
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AA seq
1620 aa
AA seq
DB search
MDMAALMWDIIVSLTLLISPASLSADKSGFRKLYVLQPGPSGTDGVHVSSISSLSGASGQ
PHSYNVELKASFGGQVRTRRMGHQSNPNPSIPIRQDAQPGRHTTSHHLKMSGVNVCGGQC
CVGWSKTPGSQRCTKPNCTPPCKNGGMCLRPHICVCKPGSKGKSCEQTTLPPSSHPTGPL
NGHTNGGLPNGGHTNGYPNGHNLIPQRPIPQQIFPQGQGQVPLPLPGTNMGHLTLSMKPS
PNGPIPYQPQVQNPVSMTMHQSKTQKYMVQQKNYHTHTQVHGVGPTLNRAIPLSVGHSPI
NVGNHTGRIKVVFTPTICKMTCTNGRCQNSCQQGNTTTIISENGHATDTLTAPNFRVVVC
HLPCMNGGKCSARDKCQCPPNFTGKFCQMANPTGHQGQHTVLNGQKTHVHSMHTLPLTYG
TGQNQGLVNVHVKHPPEASVQIHQVSSVDSNGQMKNTQSSHTFTYHSSSQSIQHGHTHSG
VIYPNQQTYPQYLPVTSKNQLGRCFQETAGMQCGKALPGLSKQDACCGTVGTSWGFHKCQ
KCPKKTSIPLIECPQGYKRLNATRCIDIDECQIQGVCPNGNCINTMGSYRCMCNPGFVPD
PSLTACFPETPALREEKGACFRLVSSGKQCLHPVSTQLSKQLCCCSVGKAWGPHCDRCPL
PGTAAFKEICPGGMGYHVTTPYIYKPKPPNGHIHPDGHGQSKPTIRHQAPVDPPMPFPTL
QQPVEALSITERQLPVPTVPRQELYTHMSVDRSVVQPEQAQLSPGVSTMRMEPALPEVVE
KVSPPAPVALPPSVESQDISPTQLAEIDECQVRPDICGAGICYNTADSYKCICDDGYRID
SEGTTCVDVDECAESPSLCANGHCQNTPGGFLCACEPGFMPNEKGTSCSDIDECLDWRVC
PSGLCYNTLGSFMCSPCPDGFEGRNGQCVDINECRDEKVCAHGQCFNREGYFVCMCDEGF
SLTPDGKACIDIDECQDDSVCIQGHCQNTEGSFICNCEPGFILSSTGDQCNDVDECLELP
QTCDGVGQCVNILGSYQCNCPHGYRQVNGTSCQDVDECEDETQLCIPNGECLNTEGSFLC
VCDAGFVSTRDPPACEDVDECVDGSRCLNGTCSNVEGSYLCHCEAGYRLEPTNQTCQDID
ECADFGKSICGVWECLNTPGSYRCEVPCPPGHSRGELGVCIDVDECSLNENTCGSHGVCQ
NTIGSFSCQCDPGFTDSQDGQGCVDVNECEKLGDVCGEATCENQEGTFLCLCPDEMQEFD
PMSAKCFSTPPVERKECYFNLNDENLCDNVLASSMTKEECCCTLGAGWGDNCEVHPCPVP
GTDQFSQMCLAGRGYVPSGDPMIPGTSLAESFKDANECTLFGNEICKDGFCSNTAGGYEC
YCKTGLYYDDSKLQCVGQRETDLYTDICWKTIMENLTCTKPIPNLQTTFTECCCLHGNAW
GMNCALCPQKNTEVYATMCNTRQFSGPHQPYGQDALVAGPVTEYGPEYGPEYDSRPLNPD
GTLHLYEDYDEPRNPYDAFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLDMSRM
ACVDINECSELNTKMSLCKNGKCINTQGSYKCVCLPGFVHSAQHNYCVPQRQNATGTSTE
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggatatggctgcgctcatgtgggacatcattgtttctctaacgttattgatttctccg
gcttcgctctcggcggataagagcggcttcaggaaactgtacgtgcttcagccgggaccg
agcggtacggacggggttcacgtgagctctatttcgtcgctatcgggagcgtcgggacaa
ccgcactcctacaatgtggagctcaaagccagctttggtggccaggtccggacccgcaga
atgggtcaccagtcgaacccgaacccgagcattccgatccgtcaggacgcgcagcccggc
cgacacacaaccagccatcatttgaaaatgtcaggagtgaacgtctgtggggggcagtgc
tgtgttggttggagcaagaccccgggatctcagcgctgcactaaacctaactgtacacct
ccatgcaaaaatggaggaatgtgcttgcggccccacatttgtgtgtgtaagccaggctct
aaaggcaagtcctgtgaacagaccactctgcccccatcctctcatccaactggaccgtta
aacggacacaccaatggtggacttccaaatggaggtcatacaaatggatatcccaacggt
cataatttaattccccagcggcctattcctcagcagatcttcccgcaaggccaaggtcaa
gtgccattaccgttgccaggcaccaacatgggacatctgactctgtccatgaagccatca
ccgaatggacccattccttatcaaccacaagtacaaaacccggtttcaatgacgatgcac
caaagcaaaacccagaaatacatggttcaacagaaaaactaccacactcacacacaggtg
catggagtaggccctaccctgaaccgggccatccctctttcagtgggacacagtccaata
aatgtagggaaccacacaggccggatcaaggtggtcttcaccccgactatctgcaagatg
acctgcaccaacggccgctgtcagaacagctgtcagcagggcaacaccaccactatcatc
agcgagaacgggcacgctacggacacgctcaccgcccccaacttcagagtcgttgtttgc
catttgccctgcatgaatggaggaaaatgcagcgcacgggacaagtgccagtgcccacca
aactttactggaaaattctgccaaatggcgaatcccactggtcaccagggtcagcatact
gtgttaaacgggcagaagacacacgtccattcaatgcacacgttgcccctcacctacggc
actggacaaaaccagggtttggtgaatgtccatgtgaaacatcctccagaagcctctgtc
cagatccatcaggtatcttcggtggacagtaacggacagatgaagaacacacagtccagt
cacaccttcacctaccacagcagcagccagagcatccaacacggtcacactcacagcggc
gtcatttaccccaaccagcaaacatacccccaatacctgccggtgacttccaagaaccag
ctaggacgctgcttccaggagactgctggaatgcagtgtgggaaagctctgcccggcctg
tctaaacaagatgcctgttgtgggacggtgggcacatcatggggattccacaaatgccaa
aaatgccccaagaaaacatcgattcctttgattgaatgtcctcaaggctataagaggctg
aatgccactcgctgtatcgatattgacgagtgtcagattcaaggagtttgtcccaatgga
aactgcataaacacaatgggcagctacagatgtatgtgcaacccaggctttgtgcctgat
cccagcctgaccgcctgtttccccgaaacacctgctcttcgcgaggagaaaggtgcttgc
ttccgattggtcagttcggggaagcagtgcttgcaccctgtgtccactcagctgagtaaa
cagttatgctgttgtagtgtgggcaaggcctggggtcctcattgtgaccgttgccctcta
cctgggacagctgcgtttaaagaaatctgtcctggaggaatggggtatcatgtcaccaca
ccatacatttacaagcccaaacctcctaatggacacatccacccagacggtcacgggcag
agcaagcccaccattagacaccaagcacctgtggatccacccatgcccttccccacccta
cagcagcccgtggaagccctcagcatcacagagaggcagctacctgtgcccacagttcct
cggcaggagctttatactcacatgagtgttgataggtcagtagtacagcccgaacaggcc
cagctgtcacccggggtgtctacaatgaggatggagcctgccctcccagaggtggtggag
aaggtgtcaccacccgctcctgtggcacttccgccatccgtagaaagtcaggacatctcc
ccaacacagctggcagagattgacgagtgtcaagtgagacctgatatctgtggtgcagga
atctgttataacacagctgacagctacaagtgcatctgtgatgacggctatagaatagac
agtgagggcaccacatgtgtagatgttgacgagtgtgcagagagcccaagtttgtgtgct
aatggtcactgtcagaacactccaggcggattcctgtgtgcgtgcgagcctggattcatg
cctaacgagaagggcaccagctgctccgatatcgatgaatgtctagattggagagtgtgt
ccgtccggtctctgctataacactctgggctctttcatgtgttctccttgtccggatggg
tttgaagggagaaatggccaatgtgttgatataaatgagtgtcgggatgaaaaagtatgt
gctcacggtcagtgcttcaatcgggagggctattttgtttgcatgtgtgatgaaggattc
tcgcttactcctgatggcaaggcctgcatagacattgatgaatgccaggatgacagcgtg
tgcatccaaggtcactgtcaaaacacagaggggtcatttatctgcaactgtgagcccggc
tttatattatcatccacgggagaccaatgtaacgatgtggatgagtgtttggagttacct
cagacctgtgatggtgtggggcagtgcgtcaatatcttgggatcttaccagtgcaactgc
ccacatggatatagacaagttaatggcaccagctgccaagatgttgatgagtgtgaggac
gagacacagctgtgcatccccaacggcgagtgtttgaacacagagggttcgtttctgtgt
gtttgtgatgccggctttgtgtccaccagggatccaccagcctgtgaggatgtagatgaa
tgtgtggatggcagcagatgtttaaatggtacctgttcaaacgtagagggctcatatctc
tgccattgtgaagcaggctatcgcctggagccaaccaatcagacatgccaggatattgat
gagtgtgctgactttgggaagtctatttgtggggtttgggaatgtctgaacacacctggc
tcttaccgatgtgaggtgccctgcccacctggccattcccgaggcgaacttggcgtctgc
atcgatgtggatgagtgttctctgaatgagaatacctgtggaagtcatggtgtgtgtcag
aatacaataggctccttcagctgccagtgcgacccgggattcacagactctcaggatggg
caggggtgtgtggatgtgaacgagtgtgagaagctcggtgacgtgtgcggtgaggccacc
tgtgagaatcaagaaggcaccttcctgtgtttgtgtcctgacgagatgcaagaattcgat
ccgatgtcggccaaatgcttctctacacctccagtggaaaggaaggagtgttacttcaac
ttgaatgatgagaacctgtgtgataatgtgctggccagcagcatgactaaagaggagtgc
tgctgtacgctaggagccggctggggggacaactgtgaggtccatccctgccccgtacca
ggaacagatcagttctcccagatgtgtcttgcaggccggggttacgttccttctggagat
cctatgattcctggaaccagcttagcagaaagcttcaaagacgcaaatgaatgcacgctt
tttggaaatgagatctgcaaagatggcttttgttccaataccgccggtgggtacgagtgt
tactgcaagaccggactctactatgatgacagcaaactgcagtgtgttgggcaaagagaa
actgatttgtacacagatatttgctggaagaccataatggaaaacctgacctgtacaaag
cccattcccaatctacagaccaccttcacagaatgctgctgtttacatggaaatgcctgg
ggcatgaattgtgctctctgcccccagaaaaatacagaggtctatgccactatgtgtaat
acccgtcagtttagtggcccccatcagccgtatggtcaggatgctttggtcgccggcccg
gtcactgaatatggccctgaatatggccctgaatatgactctcgacctttgaaccctgat
ggcacgctgcacctctacgaagattacgacgaaccaagaaatccatacgatgcatttgaa
gggctgcgagcagaggaatgcggtgtgctgaacgggtgtgagaatggacggtgcgtgcgg
gtgcaggagggatacacctgtgactgcttcgacggatacacactcgacatgtcccgcatg
gcgtgcgtggatatcaatgaatgctcagagctgaatacgaagatgtctctttgcaagaac
ggcaaatgcatcaacacgcaaggctcctataagtgtgtgtgtctgccaggatttgtccac
tccgcccagcacaactactgtgtgccccaaagacagaacgcaaccggcacgagcacggag
tga
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