Puntigrus tetrazona (Sumatra barb): 122362203
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Entry
122362203 CDS
T08985
Symbol
exd2
Name
(RefSeq) LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122362203 (exd2)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
122362203 (exd2)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122362203 (exd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
122362203
NCBI-ProteinID:
XP_043119478
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Position
17:complement(18674126..18684463)
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AA seq
617 aa
AA seq
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MSKQSTFTAALATMLGATLGGLFLWRSIRTQKRKALKGPASAEPVQAQLEADAPSCSPRD
PSPEPGALRACSLLEVPPVIVSSPEEWDALWPGFQKELSVHPVLGLDCEWVKSMRVSVKG
KASAVSLLQLATFSGRCVLVRLLAFRDAQLPLPGGLVGVLSDPRVLKVGVGCYEDGKRLT
HDHGLALSCTVDLRYLALRQRQAVLNNGLSLKSLAADLLNVTLDKSLELRCSDWEADVLS
QEQMAYAAHDAQISVALFFHLLGMDTEPQLPAEGESTFVRLASCCQGLVDVPFRGRYNGE
GEEGERRRRSRRSTVESPESGDQQVPDPRRNKRKPLGVGYSARKSPLYDNCFLHAPDGQP
LCTCDKKKAKWYLEKGIGELVSEDPFVVRLLFEPSGRPDSQKDYYLTAKENVCVVCGKAD
SYIRKNIVPHEYRRHFPAEMKDHNSHDILLLCTSCHAASNVHDGVLKQRLAEEHSAPQGC
EEGIRLLEDADRRRVRSAARALLSASDGMPQSRKEELLSVIQSFFCNGQQEVTQEMLQRA
ATLETRIFNESYVPHGLKVVQVYAERGLRGLIDLERCWRQHFLTSMQPHHLPPLWSVNHN
HDKYLRKYGEDLQILLN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagagcacgttcaccgcggctctggccactatgttaggagccaccctcggc
ggcctgttcctgtggcgcagcatccgcacgcagaagagaaaggccctcaagggccccgct
tcagccgagcccgtgcaagcccagctcgaagcagacgccccgtcctgcagcccgcgagac
ccgagccccgaacccggagctctgcgagcgtgttcgctgctggaggtgccgcccgtgatc
gtcagctccccggaggagtgggacgcgctctggccgggcttccagaaggagctctccgtc
catccggttctgggacttgactgtgaatgggtaaaaagcatgcgcgtgtccgtcaaaggc
aaggcctctgcggtttccctgctccagctggccaccttctccggccgctgtgtgctggtc
aggctgctggcgtttcgtgacgcgcagcttcctctccccgggggcctcgtcggggtgctc
tctgacccccgcgtgctgaaggtcggggtgggatgttacgaggatggcaagcggctgact
cacgatcacggcctggctctgagttgcaccgtggatctgcgctacctggccctcagacag
aggcaagcggtgctgaataacggcttgagtttgaagtctctggccgcggatctgctgaac
gtcacgctggacaagtctctggagctgcgctgcagcgactgggaggcggatgtgttgagc
caagagcagatggcctacgcagcacatgatgcccagatctcggttgccctgttctttcac
ctgctggggatggacaccgagccccagctccccgccgagggtgaaagcacgttcgtccgg
ctggcttcatgctgccaggggctggtggacgttcccttcagggggcgctataacggagag
ggggaagagggggagaggaggaggcggagccgaaggtccacagtggagagtcccgagtct
ggagaccagcaagttccagacccgcggaggaacaagcgcaaaccgctgggagtcggatac
tcggccaggaaatcacccctttatgacaattgtttccttcatgctcccgacggccagccg
ctctgcacgtgtgacaagaagaaagcaaaatggtacctggagaagggtataggagaattg
gtcagcgaggatcccttcgtggtccggctgctgtttgagccgtcaggccgcccggactcc
cagaaagactactacctcacagccaaagagaacgtgtgtgtggtgtgtgggaaagccgac
tcttacatcaggaagaacatcgtcccacacgagtacagacgccacttcccagctgagatg
aaggaccacaactcgcacgacatcctgctgctgtgcacttcctgtcacgcggcctcgaac
gtgcacgacggggtcctgaagcagcggctggccgaggagcactctgccccgcagggctgt
gaggagggcatccggctgctggaggacgcagaccgccgccgagtgcgatcggccgccagg
gctctcctcagcgccagcgacggcatgccccagtccaggaaggaggagctcctgtcggtc
atccagagcttcttctgcaacggacagcaggaggtcacgcaggagatgcttcagagagct
gccacgctggaaaccaggatctttaatgagagctacgtgccgcacggactgaaggtagtt
caggtttatgctgagcgcggcctgcggggtctcatagacttggagcgctgctggcgacaa
cactttctgaccagcatgcagccccaccatttgccccctctctggtccgtcaaccacaac
catgacaaatatctgcgcaagtacggggaggacctgcaaatcctgctcaactga
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