Puntigrus tetrazona (Sumatra barb): 122363109
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Entry
122363109 CDS
T08985
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04260
Cardiac muscle contraction
ptet04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122363109
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122363109
04261 Adrenergic signaling in cardiomyocytes
122363109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122363109
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122363109
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
VWA_3
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
122363109
NCBI-ProteinID:
XP_043120972
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Position
18:21550145..21638322
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AA seq
1096 aa
AA seq
DB search
MTVRSRSTDLVMNPFRISVLMVFLFASVHISCPSQFPSPLMIKEWVDQLQQELVSLADTA
SAGNNLRQIFMDNQNYFTVKTNNAAQLVETEARNIENFLKKRATALETLATAAENFQMEH
QWKDEFEEDDIVYFNAKDNLETNETERRKNRIKPEFKEDPSFKNRLTSYNHTAVHIPTDI
YDGSTIVLNELNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFDHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFNQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFGRYNLDKKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRE
GGSRNQHQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNP
KFQEPVTLDFLDAELENDIKVQIRTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYTWAP
VNGTDYSLALVLPEYSLHYIEANLGDTIKQAMSQWGNKAFDTMQQEKFEEYGYTFIAPRE
YCKDLKVLSNNTQFLMDFNKYIERKTPNDPLCNLTLVNRLLLDAGLTADLVNVWKDQNVD
GVLARFVATDGGVTRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIFTAPYVNKSRESG
YESGILVSKAVDLDINGAKLKPAVVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDKQ
VDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVLMITLVNTSLFSFNKTYDYQSVCDPE
RETKAAAGPRSVYVPTIADMLNVGWWASTAVWSVLQQLLLSLTLPNIVGTAYSEDDLSDA
FSKESCITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFLISDAKSSCLSCD
PKPLRQAEQPSTGPDPCVLAQNPRYRKGPDVCFDNNADEDASDCGGGCSLSPSLWPMLAL
QLLLLWLLTGTRSCLS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcgctcgagatcaacagatctggtcatgaatccgttcagaatctccgtgctc
atggtgttcctcttcgcatctgttcatatctcgtgcccatcgcagttccccagtccgctc
atgataaaagaatgggtagatcagctgcagcaggagctggtttctttagcagacacagcc
agcgctgggaataatctaagacagatctttatggataatcagaattacttcactgtgaaa
acaaataatgcggcacagcttgtggaaacagaggcacggaatattgaaaattttttgaag
aagcgagccacagctctagagactttggcaaccgcagcagagaatttccaaatggagcat
caatggaaagatgaatttgaagaggatgatatagtttactttaatgccaaggataatctc
gaaaccaatgaaacggaaagaagaaaaaaccggatcaaacctgaatttaaagaagacccg
tcattcaaaaaccgcctcacctcctacaaccatacggcggtgcatatccccactgacata
tatgacggctccaccattgtgttgaatgagctaaactggactgaagcactggaagatgtc
tttaagaaaaaccgagaggaggatccaacgctactatggcaggtcttcggcagcgcaact
ggattagctcgctattacccagcttccccttggatggatgccaggaaaacacccagtaaa
atcgacctgtacgatgtgcgccggcgaccttggtatgttcaaggtgccgcttcgcccaag
gacatgctgattcttgttgatgcgagtggaagtgtatccggactgactcttaaactgatc
cgaacctctgtcagtgaaatgctggagacactttctgatgatgattatgtcaatgtcgtc
cattttaacacaaaagtgaataacacagcgtgtttcgaccacctggttcaagctaacgtt
cgcaataagaagatcttaaaagatgcagtgcagaacatcacggccaagggcatcaccaac
tacaccaaaggcttcgagtttgccttcaaccagctgtcaaatccaaacatcaccagagct
aactgcaacaagatcataatgctgtttactgatggaggcgaggagagagcagaggagatc
ttcggcagatacaacctcgacaaaaaagtgcgtgtgttcacattctctgtgggtcaacac
aactacgacaccgggccaataaagtggatggcctgcgctaataagggatatttctacgaa
atcccatccattggagccattcgcataaacacacaggagtatctagatgttctgggcagg
ccgatggtccttgcagatgccaaacaagtgcagtggaccaacgtgtacctagacgctctg
gagttgggcctggtcatcacaggcacgttgcccgtgtttaacaagaccaaatccagggag
ggcggatctcgaaaccagcatcagaatcagctgattttaggagtgatgggggtggatgtg
tctctcgacgatatcaaaagattgacgccccgcttcacaatcggccctaatggatattat
ttcgccattgatcccaacggttacgtgctgctccatccaaacctgcaaccaaagaacccc
aaattccaggagcctgttacactggattttctggatgccgagctggaaaacgatattaaa
gtccagatacggactttgatgatcgacagagaccctggggagaaaacaatagaaacgctc
gtgaaatctcaagatgagaggtacatcgatcgaggaatcaggacgtacacctgggcgccg
gttaacgggacagactacagcctggccttggttttgcctgaatacagtctgcattacatc
gaggcaaacctgggggacactataaaacaagccatgtcacaatgggggaacaaggccttt
gataccatgcagcaggagaaatttgaggaatatgggtacacctttattgcacccagggaa
tactgcaaggacctcaaagtcttatccaacaacacccagtttctgatggacttcaataaa
tacattgaaaggaaaactccaaatgatcctctctgtaatctcactcttgtaaaccggttg
ctgctggacgccggtctcacggcagatctcgtcaatgtctggaaggatcagaatgtagat
ggagttttggcccgctttgtggctacagatggaggcgttacgcgtgtgtatcctaaaagt
gccggggaagaatggggtgaaaactctgagacctatgactcaagtttttacaaaaggagt
ctggacaatgacatatacatcttcactgccccatacgtcaacaagagcagagagtctggt
tatgagtccggcatccttgtcagtaaagcagtggacttggacattaatggagcaaaactc
aaacctgccgtggtgggagtcaaactaaacgtgtcggcctggatgaacagcttcataaac
gctaccaccaagaaaaattgcaaggatgagatctgcgggtgcctcagaaatgataagcaa
gtggactgcgtgattctggatgacggtggatttctgctcatgtccaatcaggacgaatat
atcacacagatcggtcagttctttggtgaagtggaccccgttctgatgattactctggtc
aatacctcgctgttctcttttaataaaacctatgactaccaatccgtctgcgacccggag
agagaaaccaaagctgctgccggaccccgatctgtatatgtgccgacgatcgcagatatg
ctgaatgtaggctggtgggcctccactgccgtctggtcggttttgcagcagctacttctc
agtctgactctcccaaatatagtgggaacagcgtactcggaggatgacctctcggatgcg
ttctccaaagagagctgtatcaccgaacagactcagtatttctttgagaacgagaacaaa
tctttctctggagctatggactgtggaaactgctccagaatgtaccgggccgagaagctc
ccaaacacgaatttggtttttttgatctctgacgcaaagagttcctgtctgtcctgcgat
cccaaacccctgagacaagccgaacagccctctactggtcctgatccatgtgtgctggcc
cagaaccctcggtacaggaaaggaccggacgtctgctttgacaacaacgcagatgaggac
gcatctgactgtggtggaggctgtagtttgagtccgtctctctggccgatgctggctctt
cagctccttctgctctggctgctcactggaaccagaagctgtttgtcctga
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