Pseudonaja textilis (eastern brown snake): 113436609
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Entry
113436609 CDS
T09005
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113436609 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113436609 (SLIT1)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Axon guidance molecules
113436609 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Laminin_G_2
EGF
Laminin_G_1
LRRCT
LRRNT
hEGF
LRR_9
LRR_1
EGF_TEN
LRR_14
EGF_Teneurin
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
113436609
NCBI-ProteinID:
XP_026556878
Ensembl:
ENSPTXG00000018436
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MENQINVVERGAFDDMKELERLRLNRNQLHTLPDLLFQNNQALSRLDLSENFLQAVPRKA
FRGATDLKNLQLDKNHISCIEEGAFRALRGLEVLTLNNNNISSIPISSFNHMPKLRTFRL
HSNQLICDCHLGWLSQWLRQRPTIGLFTQCAGPPSLRGLNVAEIQKNEFSCSGQDDATRT
HICSFSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSSY
KKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIMELPKGVFGGLYALQLLLLNANK
INCIRADAFADLQNLSLLSLYDNKIQTLAKGTFATLRAIQTLHLAQNPFICDCNLKWLAD
FLRANPIETSGARCASPRRLANKRIGQIKSKKFRCSPKEQYFIPGTEDYHLNSECHSDVV
CPAKCRCEANVVECSNLRLTKIPERLPQATAELRLNNNEITVVEATGIFKKLPHLKKINL
SNNKVSEIEDGAFEGAASVSELHLTANQLESVRSSMFRGLDGLRTLMLRNNRINCIHNDS
FTGLRNVRLLSLYDNQISIISPGAFDTLQSLSTLNLLANPFNCNCHLAWLGDWLRKRKIV
TGNPRCHNPDFLRQIPLQDVAFPDFRCEEGQEETICFPRPQCPQECTCLDTVVRCSNKHL
KSLPKGIPKNVTELYLDGNQFILIPGQLSTFRYLQLVDLSNNKISFLSNNSFTNMSQLTT
LILSYNALQCIPSLAFEGLHSLRLLSLHGNDISTLPEGIFADVISLSHLAIGANPLYCDC
QMRWLSSWVKTGYKEPGIARCAGPADMEGKLLLTTPAKKFECQGPPLPIIQAKCNPCLSN
PCQNKGSCQKDPLGSYRCVCPSGYKGKYCDLSVDGCSHRPCENGGTCLPQEGDGASFKCA
CVDGFEGPRCNLKTNSCNNSCKNGGTCVNGSTNHTCLCLPFYTGTYCEQPVDACSPELSP
CQHNAICRVSLGGPKCECMPGYVGDNCSVDYNDCLDHQCQNNAKCFDEPNGYSCLCTGGF
SGQLCEIPPHGSFQSSPCERAECQNGANCVELGNRALCQCLPGFGGLKCEKLLSVNFVDR
DTYLQFTDLQNWPTANITLQVSTAEDNGILLYNGDTDHMAVELYQGHVRVSYDPGSYPSS
ALYSAETINDGQFHTVELVTFERMVNLSIDGGDPMTMDSFGKAHTLNSEAPLYVGGMPVD
VNSAAFRVWQILNGSSFHGCIRNLYINNELQDFTKTQMKPGVVPGCEPCRKLYCMHGICQ
PNTAHGPICYCESGWTGPHCDQPITNPCQGHKCEHGICMPLDALSYSCQCQDGYKGALCN
QEVELRNPCRSLECVHGQCQISDAGEAYCECSSGFDGDLCDQESECRGEAVRDFHQVQRG
YAICQTTRPVSWVECQGSCPGLGCCGGLRLKRKKYTFECSDGSSFVEEVEKPSKCGCSHC
M
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagatcaacgtggtagaacgaggagcgtttgacgacatgaaagaattagag
cgactacggcttaataggaaccagctacacactttgccagacctcctcttccagaataac
caagcattgtcacgcctagacctgagtgagaactttcttcaggctgtgcctagaaaggca
ttccgtggagccactgatcttaagaatttgcagctggacaagaaccatataagttgcatt
gaagaaggggcctttcgtgctctccgggggttggaagtattgactttgaacaacaacaat
atcagctccatacccatctccagcttcaatcatatgcccaaactgcgtactttccgcttg
cactccaatcagctgatctgtgattgtcatttgggttggctttcccagtggctccgccag
cgacctactattggactcttcacacaatgtgctggtcccccatcccttcgtggtctaaat
gttgcagaaatccaaaagaatgaattcagctgctcaggccaagatgatgctaccagaact
cacatctgcagtttttcatctgggtcctgtcctgccatgtgtacttgtagcaatggcatt
gtagattgtcgtggcaaaggtctaacagccattcctgccaacttgccagaaaccatgaca
gagatacgtctggaactcaatggcatcaagtccatccctcctggagccttctcatcatac
aagaagctgcgtaggatagacctcagcaacaatcagatttcagaaattgcacctgatgct
ttccaaggccttcgttcactcaactctctagtcttgtatgggaacaagatcatggaattg
cccaaaggagtatttgggggcctctatgcactacaactactgctactgaatgccaacaag
attaactgcattcgggcagatgcctttgctgatctgcagaacctctcactgctctctctt
tatgacaacaagatccagaccctggccaaaggcacttttgccaccctgcgtgccatccag
acactccatctggcccagaacccctttatttgtgactgcaacctgaagtggctggcagac
ttcttgcgtgccaatcctattgagacaagtggtgctcgttgtgccagtccccggcgtttg
gccaataagcgcattggacagatcaagagcaagaaattccgctgttcccccaaggaacaa
tacttcattccaggtacggaggattatcatttgaacagtgaatgccatagtgatgtggtt
tgcccagccaagtgccgctgtgaagccaatgtggtggagtgttccaatctgaggctgaca
aagatcccagagcgcctcccacaagctactgctgaattacgcttgaataacaatgaaatc
acagtggtggaggcaacaggtatcttcaagaaacttccacatttaaagaaaataaatttg
agcaacaacaaagtctcagagatcgaggatggggcctttgagggggcagcctcagtgagc
gagttacatttgactgctaaccagttagagtcagtgcgcagctccatgttccggggcttg
gatgggctgcgaacactgatgctgaggaacaatcgcatcaactgtattcacaatgacagc
ttcactgggctgcgcaatgtgcgccttctctccttgtatgacaatcagatcagcattatt
tcaccgggggcttttgatacattgcagtcactctctactctgaacctactggctaacccc
ttcaattgcaattgtcatctggcctggctgggtgattggcttcgcaagaggaagattgtg
actgggaatccacgctgccacaatccagattttctgcgccaaatcccactacaggatgtt
gccttccctgacttcaggtgtgaggaaggtcaggaggagaccatctgcttcccacgtcct
cagtgcccccaagagtgcacttgcctagacacagtagttcgctgcagcaataagcacctg
aaaagcctcccaaaagggatacccaagaatgttactgaactctatttggatggcaaccaa
ttcatccttattccaggacaactctccaccttccgttacttgcagctggtagacctgagc
aacaataagatcagtttcctcagcaacaattccttcaccaatatgagccaactgactact
ttgatcctcagctacaatgcactgcagtgtatcccctcactagcctttgaaggtctccat
tcgctacggctgctgtctcttcatggaaatgatatctccacgctccctgaagggattttt
gctgatgttatctccctatctcatctagcaatcggtgccaaccccctgtattgtgactgc
caaatgcgctggctctcaagctgggtcaaaactggctacaaagaacctggcatagcccgt
tgtgctggtcctgcagatatggaaggcaaacttctgctcacaactccagctaagaagttt
gaatgccaggggcctcccctaccaatcatccaggccaagtgtaacccctgtctctccaat
ccctgccaaaacaagggcagttgtcaaaaagatcccctgggatcctatcgctgtgtctgt
cccagtggttataagggcaaatactgtgacctatctgttgatggttgctcccacaggccc
tgtgagaatggtgggacctgcctgcctcaagaaggagatggagccagctttaaatgtgct
tgtgtggatggatttgaaggcccaagatgtaatctgaagaccaatagttgcaacaatagt
tgcaagaatgggggcacgtgtgttaatgggtccactaaccacacatgcttgtgcctaccc
ttctatacagggacatattgtgaacagccagtggatgcctgttctccagaactcagcccc
tgccagcataatgccatatgtagagtctctcttggtggacccaagtgtgaatgtatgcct
ggctatgtgggagataattgcagcgtggactacaatgactgcctagaccaccaatgccag
aacaatgccaagtgttttgatgaaccaaatggttattcctgtctttgtactggtggtttc
agtggtcagctctgtgagatcccacctcatggctcctttcagtccagtccctgtgagaga
gcggagtgccagaatggtgccaactgtgtggagttaggcaatcgcgccttatgccagtgc
cttcctggctttggagggctcaaatgcgagaagctattgagtgtcaattttgtggatagg
gacacatacctacaattcacagacttacagaattggcccactgccaatattactctgcag
gtctccacagctgaagataatgggattctcttgtataacggggacactgaccacatggca
gtagaactttatcaaggccatgtgcgtgtcagctatgatccaggcagttaccctagctca
gctctttatagtgcagagaccatcaatgatggacagttccatacagtggaactggtaaca
tttgagcggatggtaaacctatctatcgatggaggtgaccccatgaccatggatagcttt
ggcaaggcccacactctgaattctgaggctccactatatgtggggggcatgccggtggat
gtgaactctgctgccttccgagtttggcaaatcttgaatggttccagcttccatggatgt
atccgcaatttatacatcaacaacgaattacaagactttactaagactcagatgaaacct
ggagttgtgcctggctgtgaaccttgccgcaagctctactgcatgcatggcatttgccaa
cccaacactgctcatggacccatttgttattgtgagtcaggctggactgggccccattgt
gaccagcccattactaacccttgccagggacacaagtgcgaacatggaatctgtatgcct
cttgatgcactttcctatagttgccagtgccaagatggttacaaaggagccttgtgcaac
caggaagttgaactacgcaacccatgcaggagcttggagtgtgttcatggtcagtgccag
atctcagatgcaggagaggcctattgtgaatgcagctcaggatttgatggggatctctgt
gatcaagaatcagagtgtcggggagaggctgtgcgagatttccatcaagtccagcgaggt
tatgctatttgccagacaacacgcccagtctcctgggtggagtgccagggatcgtgccca
ggactaggctgctgtggaggactgcgtcttaagcgcaagaaatatacctttgaatgcagc
gatggttcatccttcgtggaggaagtggaaaaacctagcaaatgtggctgttcccattgc
atgtag
DBGET
integrated database retrieval system
