Pseudonaja textilis (eastern brown snake): 113442657
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Entry
113442657 CDS
T09005
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04115
p53 signaling pathway
ptex04145
Phagosome
ptex04148
Efferocytosis
ptex04350
TGF-beta signaling pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113442657 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113442657 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113442657 (THBS1)
04148 Efferocytosis
113442657 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
113442657 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113442657 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113442657 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptex04131
]
113442657 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113442657 (THBS1)
Membrane trafficking [BR:
ptex04131
]
Endocytosis
Phagocytosis
Opsonins
113442657 (THBS1)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113442657 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
TSP1_ADAMTS
EGF
TSP1_CCN
cEGF
Motif
Other DBs
NCBI-GeneID:
113442657
NCBI-ProteinID:
XP_026566153
Ensembl:
ENSPTXG00000000464
UniProt:
A0A670XPW7
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MELSGGLFLFLMLGVCTTNRIPETSDDNSVFDLFELIGFGRKGAHKGQGVHSIKGLETSS
PAYRIDDANRIPAVSDHKFQDLLYAIQAEKGFILLANLRPIKKDAGTILAVERKDNSGYV
FKLVLNGKAKTLDLSVFPDEGNQSLVSVEEVKLPLARWSSITLFVQEDQAQLYVGCEKMT
NVELEIPIQDIFTRDLSNRARLRIAKGGVNDNFPGMLQNVRFVFGTTLETILRNKGCQIS
TGTLIKLDNPMNGSRPAIRTNYIGQKTKDVCGFSCDDLTKMFIELQSLRALVTKVEISVN
NMELIAPHNIKKGICLHNNVVYENTAEWTTDTCTTCTCQNSAVMCHKVSCPLMPCSNATV
PDGECCPRCWPSDSADDAWSPWSEWTTCSTTCGNGIQQRGRSCDRINHLCEGSSVQTRIC
NMQECDKRFRQNGAWSHWSPWSSCSVTCGSGLITRIRLCNSPLPQMGGKTCEGEARENMP
CQKSPCPINGNWGPWSPWDACPITCGGGIQKRSRLCNNPEPKFGGKDCIGDATATQICNK
QDCPIDGCLSNPCFAGSKCTSFPDGSWKCGPCPVGYQGNGIRCKDIDECQEIPDTCFVLG
GIHRCENTVPGYHCQPCPSRFTGPQPFGQGVEDAMANKQVCKPRNPCADGTHTCNKYAKC
IYLGHFSDPMYRCECKPGYAGNGIICGEDSDLDGWPNENLQCVANATYHCTKDNCPKLPN
SGQEDYDDDGIGDACDDDDDNDNIPDDRDNCPFNFNPQQYDYDRDDVGDHCDNCPYNHNP
LQIDTDQNGEGDACAVDIDGDGILNERDNCQYVYNVDQTDSDLDGVGDQCDNCPMAHNPD
QMDSDSDRIGDKCDDNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGI
PDERDNCRLVPNRDQLDSDGDGRGDACKDDFDNDKVNDIDDICPENVHISETDFRRFQMI
PLDPKGTSQIDPNWIVRHKGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYA
GFVFGYQSSSRFYVVMWKQVTQTYWEVQPTRAQGYSGLSIKVVNSTTGPGIHLRNALWHT
GNTVGQVKTLWHDPRQIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPLYDKTY
AGGRLGLFVFSQEMTFFSDLKYECKDQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggagctatccggtggtctctttctctttctgatgcttggagtctgcacaacgaaccgg
attccagagactagtgatgacaacagtgttttcgatctctttgagttaattggctttggc
cgcaagggagctcacaaaggccagggggtacattccattaaaggactggagacttccagc
cctgcctaccgcatagatgatgccaaccgtatcccggcagtttccgaccacaaatttcaa
gaccttctttatgccatccaagccgagaagggcttcatcttgttagctaatcttcgcccc
ataaagaaggacgctggcaccatcctggccgtggagcgcaaggacaattctggctatgtt
tttaagttggtgctcaatggcaaggcaaaaactttggacctgagcgtctttcctgatgaa
ggcaaccaaagtttggtgtcggtggaggaggtgaagttgcccctggcgcgatggagtagc
atcactctctttgtgcaagaggatcaggctcagctctatgtgggctgtgaaaaaatgaca
aatgttgagctggaaattcctatccaggacatcttcactcgggatctgtccaacagagcc
agactccgtattgctaaaggaggagtgaatgacaacttcccgggaatgcttcagaatgtt
cggtttgtgtttggaactacactggaaaccatcctgaggaataaaggctgtcaaatctct
actggaacacttattaaattagacaatcccatgaacggctcccgtccagccattcgcacc
aactacattggccagaaaaccaaggacgtctgtggcttttcttgtgacgatctaaccaaa
atgttcatagaactgcaaagcctgcgtgccctggttacgaaggttgaaatctctgtcaac
aatatggaacttattgccccacataatataaagaaaggaatatgtctccacaataatgtt
gtgtatgaaaatacagctgagtggaccactgacacctgtaccacatgtacctgccagaat
tccgctgtaatgtgccataaagtgtcttgtccactcatgccttgttccaatgccacagtt
cctgatggtgaatgctgcccgcgatgttggccaagcgattccgcagatgatgcttggtct
ccctggtctgaatggaccacttgctctacaacctgtggcaatgggattcagcagagaggt
cgctcttgtgacagaatcaaccatctttgtgaaggctcctcagtgcaaacacggatatgt
aacatgcaagaatgcgataagagattccgacagaatggtgcttggagccactggtcccct
tggtcttcctgctctgttacttgtggaagtgggttaatcactcgaatccgtctgtgcaat
tctccacttcctcagatgggaggcaaaacatgtgaaggagaggcacgagaaaacatgcct
tgccagaaaagcccatgcccaattaatggaaactggggaccatggtcgccttgggatgcc
tgtccaattacgtgtggaggaggcattcagaaacgcagtcgtctctgcaataatccagag
cccaaatttggagggaaggattgcattggtgatgcaacagccactcagatatgcaacaag
caggattgcccaatcgatggatgtctatctaatccttgttttgcgggaagtaaatgcact
agcttccctgatggttcctggaaatgtggcccatgccctgttggctatcaaggaaatgga
attagatgcaaggatattgatgaatgccaagagatcccggatacttgctttgtacttggt
ggaatacacagatgtgagaatactgtacctggttatcactgccagccttgtccctcccgc
ttcacaggaccacagccttttggtcaaggcgtggaagatgcaatggcaaacaaacaggta
tgcaagccacgtaatccatgtgctgatggaactcacacctgcaacaaatatgccaaatgc
atctaccttggacacttcagtgacccaatgtaccgctgtgaatgtaaaccaggatatgcc
ggcaatgggattatctgtggagaagacagtgacttagatggatggccaaatgagaatctt
cagtgtgttgccaatgctacttatcactgcactaaagataattgccccaaacttcccaat
tctggacaagaagattatgatgatgatggaattggtgatgcctgtgatgatgatgatgac
aacgacaacattcctgatgatagggataactgtccattcaatttcaatccacaacagtat
gactatgatagggatgatgttggtgatcactgtgataattgcccatacaaccacaatcct
cttcagatagacacggaccaaaatggagaaggcgatgcctgtgctgtggatattgatgga
gacggcattcttaatgaaagagacaactgccaatatgtgtacaatgtggatcaaacggat
tccgacttggatggtgttggagatcagtgtgacaactgtccaatggcgcacaatccagac
cagatggattcagattccgatcgcataggggataagtgtgatgacaaccaggatattgat
gaagatggccaccagaataatcttgataactgtccttatgtgcccaatgcgaaccaagct
gaccacgacaaagatgggaaaggggatgcctgtgatcatgatgatgacaatgatggtatt
cctgatgaaagagataattgcagattggttcccaaccgtgaccaacttgattcagatggt
gatgggcggggagatgcatgcaaagatgattttgacaatgataaggttaacgacattgat
gacatctgccctgagaatgttcacataagtgagacagacttccgtcgattccagatgatt
cccttggacccgaagggaacatctcaaattgatcccaactggattgttcgtcacaaaggc
aaagaactggttcagacagtcaactgtgatcctggacttgctattggttttgatgagttt
aatgctgttgacttcagtggtactttcttcattaacacggaaagagatgatgactatgct
ggctttgtatttgggtatcaatccagtagccgtttttatgtggtcatgtggaaacaagtt
acccaaacatattgggaagtacagcctaccagagctcaaggatattcgggtctttctatc
aaagtagtaaactccaccacaggtcctggaatacaccttcgaaatgccttgtggcatact
ggaaatactgttggacaggtaaagactctgtggcatgaccctcgtcagataggttggaaa
gatttcactgcttatagatggcgtctcagtcacaggccaaaaactggcttcattagagtg
gtaatgtatgaaggaaagaagatcatggcagactctggtcctctctatgacaaaacctac
gctggcggtcgcttaggactgttcgtcttctctcaggaaatgacattcttctctgatcta
aaatatgagtgcaaagatcaatga
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