Pseudonaja textilis (eastern brown snake): 113444625
Help
Entry
113444625 CDS
T09005
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04622
RIG-I-like receptor signaling pathway
ptex04623
Cytosolic DNA-sensing pathway
ptex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113444625 (DDX58)
04623 Cytosolic DNA-sensing pathway
113444625 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113444625 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptex04054
]
113444625 (DDX58)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113444625 (DDX58)
Pattern recognition receptors [BR:
ptex04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
113444625 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
CARD
AAA_19
Motif
Other DBs
NCBI-GeneID:
113444625
NCBI-ProteinID:
XP_026569247
Ensembl:
ENSPTXG00000014633
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MTEIQRENLLRCKDYIVKTLNPAYILSYMKTWLSDEAVEQIQEQSNRPTKAAELFLQSIL
QLKEDGWFRGFLDALKASDYTGLYQAIETWDFKTIESLEPHRELLKRIEPAIQDINVTEL
QGYMGECLQSQEWEEIHQISRNKGRRASASKLVECLYRSDKEHWPKMFQHALYEAGYDGH
GKLWDLKGDDNADVEMGNDESSGVFQIQISEEAESDNLCESSCSASDTFQQTRYVPRKAR
SYQIELAEPALNGKHTMICAPTGSGKTFVSIMICEHHLCNRPAGQTGKVVFLATKVPVYE
QQKKVFQEHFKTDYKIDGICGENASSTSAEIVIQENDIIVMTPQILLNSLNNKGTNISLS
TFTLMIFDECHNTTGNNPYNVLMFKYLDLKLKQGARSLPQIVGLTASPGIGSAKNIGEAI
DYICKICASLNIEVISTVRKNIKDLEEIVHKPEKIIKLQYALNQNVNKEISALHCRPFFL
KKIFPSPLDDLSVIKKQCYGTQKYEQWVVDMQKKAVVLQCKNAEEESRVCRALFICMQHL
RKYNDALIINEDARTKDALDYLKDYFEDIKNCYFDDIEQQLASNFEVNLSELTAASEDES
NENPKLEDIREILEEAYHVNPETRTILFVKTRALLAALKNWIEETPELQFLKPQTLMGRG
KRNHCTGMTLPNQKGTLDAFKINGDSKLLIATSVADEGIDIVQCNLVLLYEYTGNIIKMI
QVRGRGRAKDSKCILVTSKKEEEEKERYNLQKEKMMNKAIEEVQSWDEKKFAKKINELQK
QQIKMLASKRKTTEPKPWKDNLVLLCGKCKTEVCSTEDLRVIEESHHTVLGEKFKTRYIT
KPHKAARSYGDFEKKFKMHCIIDSCHHDWGIIVKYKTFEDMPIIKIESFSVKDVVSNRQN
HFGKWKDVDFAVKDLDFEELSY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatccaacgagaaaatttgcttcgctgcaaggactatatagtgaagactttg
aatcccgcttatatattgagctacatgaaaacctggctgtctgacgaggctgtggagcaa
atccaagagcaaagcaaccggccaaccaaggcagcagaactctttcttcagtctattcta
cagctcaaggaggatggatggttccgtggttttcttgatgcgctgaaagcatcagactat
actggcctttatcaagcaattgaaacatgggatttcaagacaattgaaagtttggaacct
cacagggaactgttgaaacgaattgagcccgctattcaggatattaacgtcacagaactt
caaggctacatgggagaatgcctccaatctcaggaatgggaagaaattcatcagattagt
cgcaataaggggagaagagcaagtgcaagcaaactggtggaatgcctgtatcgatcagac
aaagaacattggcctaaaatgttccaacacgcactgtatgaggctggatacgacggtcat
ggcaaactgtgggatttgaaaggagatgataatgcagacgttgaaatgggaaatgatgaa
agcagcggtgtttttcaaatacagatttctgaagaagcagaatctgataatctttgtgag
agttcatgttcagcttcagataccttccagcagaccagatatgtgccgaggaaggcaagg
agctatcagatagaacttgctgagcctgctcttaatggcaaacacaccatgatttgtgcc
cctactggatctgggaagacttttgtgtctattatgatatgtgagcatcatctctgcaac
agacctgctgggcagacaggaaaagtagtcttcctcgctacaaaagttccagtttatgaa
caacagaagaaagtcttccaggaacacttcaaaactgactacaaaattgacggcatctgt
ggagaaaatgcttcctcgacttctgcagaaatagttattcaggagaatgatattattgtc
atgacgccccagattcttttgaactctctgaataataaggggacaaatatttctctttca
acattcacattgatgatattcgacgagtgccacaacactacggggaataacccatataat
gtgctaatgttcaagtatttggaccttaaactgaagcaaggagcacgctcattacctcag
attgtaggcttgaccgcttctcccggcattggcagtgccaagaacataggtgaggccata
gactacatctgcaagatttgtgcttcgctcaatattgaagtgatctcaacagtcagaaag
aacataaaggaccttgaagaaattgttcacaaacctgaaaaaatcattaaattacaatat
gccttgaatcagaacgtgaataaagagatctctgctcttcattgtaggccatttttttta
aaaaaaatctttccttctccattagatgacttgtctgtgatcaagaaacagtgttatggg
acccagaagtacgagcagtgggttgtcgacatgcagaagaaagctgtggtgttacagtgt
aaaaatgcagaagaagagagccgagtctgcagggctctgtttatttgcatgcagcacctc
cggaaatacaatgatgccttaatcatcaatgaagatgcccgaaccaaagatgccttggat
tatctgaaagattattttgaggatataaaaaattgctactttgatgatattgaacagcag
ttggcttcaaattttgaagtcaatttgtcagaactcactgctgcttccgaggatgaatca
aatgaaaaccctaaattggaagatattcgagagattttggaagaggcatatcatgtcaat
cctgagacacgcactattctcttcgtgaagacaagagcgctgctggcagcattgaagaac
tggatagaagaaacgcctgaacttcagttcttgaagccacagacgctgatgggacgtggg
aaaagaaaccattgcacaggcatgaccctcccaaatcaaaaaggcactttagatgccttc
aaaatcaatggggacagcaagctgctaatagcaacttcagtggctgacgaagggatcgat
attgttcagtgcaacctggtcctactatatgaatacacaggcaacatcatcaaaatgata
caagtcagaggtcgtggaagagcaaaagacagcaagtgcattcttgtgacgagcaaaaaa
gaagaggaagagaaggagagatacaatttacaaaaagagaaaatgatgaacaaagctatt
gaagaggtacagagttgggatgaaaagaagtttgcaaagaagataaacgagttgcaaaag
cagcaaataaaaatgctagcttccaagagaaaaacaacagaacccaaaccctggaaagac
aatctagtccttttgtgtgggaaatgcaaaaccgaggtctgcagcacggaggacctccgg
gtgattgaggagtcgcaccacacggttttgggcgagaaatttaaaacacggtatatcaca
aaacctcataaggcagcacgcagctacggggattttgagaaaaaattcaagatgcattgc
atcattgacagttgccatcacgactggggaatcattgtgaagtacaagacctttgaagac
atgcccatcattaaaattgagagtttttctgtgaaggatgttgttagcaacaggcagaat
cattttggaaaatggaaggatgttgattttgcagtgaaagaccttgattttgaagagcta
tcttactga
DBGET
integrated database retrieval system
