Candidatus Profftia tarda: PROFFT_A_00290
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Entry
PROFFT_A_00290 CDS
T07286
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PROFFT_A_00290 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_00290 (nth)
Enzymes [BR:
ptf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PROFFT_A_00290 (nth)
DNA repair and recombination proteins [BR:
ptf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PROFFT_A_00290 (nth)
Prokaryotic type
PROFFT_A_00290 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF4817
Motif
Other DBs
NCBI-ProteinID:
CAD6507022
UniProt:
A0A8E4EZP6
LinkDB
All DBs
Position
1:complement(59248..59895)
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AA seq
215 aa
AA seq
DB search
MMNQQKRKYILERLHRNNPHPATTLIYASHFELLISVLLSAQTTDNKVNKATARLYQVAN
TPSDFLALGIEGIKEYIKILGLYNRKAKNIIKTCRILLDKYNGIIPENRAALESLPGVGR
KTANVVLNTAFHWPTIAVDTHVFRICNRTGFAPAENVFAVENKLLKLVPKKFQDNCHNLL
VMHGRYTCVARKPHCNACVIEDLCEFKKKFFYIII
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
attatgaatcagcaaaaacgcaagtacattctggagaggttacaccgcaacaatcctcat
cccgcaacaacgctaatatatgctagtcatttcgaattacttatttccgtattattatca
gctcagaccactgataacaaagttaataaagccacggcacgtctttatcaggttgcaaat
acgccaagtgattttctcgcacttggaatcgaaggtataaaagagtatattaaaatccta
gggctatataatcgcaaagcaaaaaatattataaaaacgtgtcgtatacttcttgacaaa
tataatggaataattccggaaaatagagcagcactagaatcgctacctggtgtaggcagg
aaaacagcaaacgtagttctaaacactgcctttcattggcctaccattgccgtagataca
cacgtttttcgcatatgcaatcgtacaggatttgcgcctgctgaaaatgtttttgcagtg
gaaaataaattactcaagttagtaccaaagaagtttcaagataactgccataacttgcta
gtcatgcacggacgatacacttgtgttgcacgcaagccacactgcaatgcttgtgttata
gaagatttatgtgaatttaaaaaaaagtttttctatatcataatatga
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