Panthera tigris altaica (Amur tiger): 102964118
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Entry
102964118 CDS
T02988
Symbol
PCDH15
Name
(RefSeq) protocadherin related 15
KO
K16500
protocadherin-15
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptg03037
]
102964118 (PCDH15)
04515 Cell adhesion molecules [BR:
ptg04515
]
102964118 (PCDH15)
Cilium and associated proteins [BR:
ptg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102964118 (PCDH15)
Cell adhesion molecules [BR:
ptg04515
]
Cadherins
Protocadherins
102964118 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
102964118
NCBI-ProteinID:
XP_015400199
LinkDB
All DBs
Position
Un
AA seq
1732 aa
AA seq
DB search
IRAPPGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDP
PVNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHDSYYATVNELTPVGTTIF
TGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTR
YFVIIQANDRAQNLNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIP
ELRTPEELNPIVVTPPIQAVDQDRNIQPPADRPGILYSILVGTPEDYPRFFHMHPRTAEL
SLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILES
APVGATISDSLNLTTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQ
PVDREEQQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMSPGDS
VIQLTAVDADEGSNGEITYEILAGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAAD
NAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDP
ITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIVTASDGRPDGTSTATVNVLV
TDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITS
NGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVI
VEENLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPD
QEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITT
VYAEDADPPGLPASRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVV
AFDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELAARGTTVGVISAAAINQSI
VYSIVSGNEEGLFGIHNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNT
AKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSAMAYRLIIPP
IKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDNYGQGLSGKADVLVSVVNQLD
MQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCD
LTVYAIDPQTNRAIDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRG
ESLGYTEGALLALAFIIILCCIPAILVVLVSYRQFKVPQAECTKTARIQSALPAAXXXXP
VAAPPPPPPPPGAHLYEELGDSTMHKYEMPQYGSRRRLLPPAGPEEYGEVVGEAEEEYEE
EEEKAEKIKKPKVEVREPSEEEEVVVTIEKPPLAEPPGTTWERARIFPMIFRKVRGLAER
RGVVDLESEEWQRRLEEADKDYLKLTLDRDEATESTVESEEESSSDYTEYSEEESEFSES
ETPSEGESESETPSEGEEEESSTPESEESESTESEGEKARKNIFLARRRPVVEEVKEVKG
RKREPPEEPEEEPREEEEGEEEEGGPAGGESELASVDEPADLEVTEEGSAEAAPGEEGSA
SEEESEPASSVSSSSESQSGGPWGFQVPEQDSSRDARRDRRPGGSEGYDTAL
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atcagagcaccgccaggtacgattctggtggataacatgctgatcaaagggactgcggga
ggaccagaccccaccatcgaactttccttaaaggacaatgtggattactgggtgttgctg
gaccccgtcaagcaaatgctctttctgaacagcacgggcagagttctggatagagacccc
ccggtgaacatacactcgatcgtggtgcaggtacagtgtgtcaacaagaaggtgggcacc
gtcatctaccatgaggttcgcatcgtggtgagggaccgcaatgacaactctcccacgttc
aagcacgacagctactacgccacggtgaatgagctcactccggttggcaccacaatattt
acagggttttcaggagacaatggagctacagacatagatgatggaccaaacgggcagata
gaatacgtcatccagtacaatccggaggacccgacatccaatgacacctttgaaatcccc
ctcatgttgaccgggaatgtggtgttgaggaagaggctcaactatgaagacaagactcgg
tactttgtcatcatccaagctaatgaccgggcacaaaatctgaatgagcggcgaaccacc
accaccaccctcacggtggatattctggacggagacgacttgggtccgatgtttcttcct
tgtgtccttgtgccgaacactcgtgactgtcgcccgctcacctaccaagctgccatacct
gagctcagaactccggaagaactgaaccccatcgtggttaccccgcccatccaagctgtt
gaccaggaccggaacattcagccaccagcagatagaccaggcatcctctattccatcctt
gttgggactccggaggattacccacgatttttccatatgcatcctaggacggcagaactt
agcctcctggagcccgtaaacagagattttcaccagaaatttgatttggttattaaggct
gaacaagacaatggccaccctctgccagcctttgccagtctacatattgaaatactggat
gaaaacaaccagagtccctacttcactatgcccagttatcaaggctacattctggaatct
gccccagtgggagccactatctccgacagtctgaatttgaccacccctcttagaattgtg
gctctggacaaggacatagaggatacgaaagacccagagcttcacctttttctcaacgat
tacacctcagtcttcaccgtcacacagaccggtatcactcgctacctcaccctacttcaa
ccagtggaccgggaagagcagcaaacttatactttttcgataacagcatttgatggtgtg
caagaaagcgagccagttattgtcaatatccgggtgatggatgcaaatgataacactcca
accttccctgaaatatcctatgatgtctatgtttatacagacatgagccccggggacagc
gtcatacagctcaccgcggtggatgcagatgaagggtccaacggggagattacctacgaa
atcctagctggggctcagggagacttcaccatcaaccgaaccacggggctcatcaccatc
gctcagggggtggcgctgacagtggggcgcacctatgcgctcacagtccaggctgcagac
aacgcgcctcctgcagagagaaggcactccatctgcaccgtgtacattgaagtgcttcct
ccaaataatcagagccctccccgcttcccacagttgatgtacagccttgaaatcagtgaa
gccatgaggattggtgctgttttattaaatctccaggcaactgatcgagagggagaccca
ataacatatgccattgagaatggagatccccagcgagtttttaatctttcagaaactact
gggattctaaccttagggaaagccctggacagggagagcacggatcgctacattctgatc
gtcactgcttccgatggcaggccggacgggacctcaactgccacggtaaatgtgttagtg
acagatgtcaatgacaacgccccagtgttcgatccctatctgcctcgaaatctgtccgtg
gtcgaagaagaagccaatgcgtttgtgggtcaagtaagggcaacagaccctgatgcggga
ataaatggccaggtgcactacagtctgggcaacttcaataatctctttcgcatcacatct
aacgggagtatttacacagcagtgaagcttaaccgagaggtcagggactactatgaactt
gtcgttgtggcaaccgatggggcggttcacccgcgtcactcaactctgacgctggccatc
aaagtgttggatattgatgataacagtcccgtgttcactaactcaacatatactgtcatc
gtagaagagaacctgccagccgggaccaccttccttcagatagaggccaaagatgttgac
ctcggagcaaatgtgtcttatcggatcagaagcccagaagtcaagcacttttttgcacta
catccgtttacaggagaactgtccctcttaaggagtttggactatgagtcatttccagac
caggaagcaagcatcacttttctcgtggaggccttcgatatttatggaacgatgccaccg
ggcattgctactgtcacagtgatagtgaaggatatgaatgattatcctccagtatttagt
aaacgaatctacaaagggatggtggctccggatgctgtcaagggcacgcctatcaccacg
gtttatgctgaagacgcagaccctcctggattacctgcaagtcgtgtgaggtacagagta
gatgatgtccagtttccttatcctgctagtatttttgacgtagaagaagattctggaaga
gtaataactcgagtcaatcttaatgaagaacctacgacaatttttaagttggtggtcgtc
gcttttgatgatggtgagcctgtgatgtccagcagtgccacggtgaagattctggtctta
catcctggagaaatcccacgcttcacacaagaggaatatagaccccctccagtgagcgaa
cttgctgccagaggcacaacagttggtgtcatttctgcagcggccatcaatcagagtatc
gtgtactccattgtctcaggaaacgaagagggtctgtttggaatccacaacatcacgggt
gttatctatgtcaatgcccctctggattatgagacaagaacgagctatgtgcttcgcgtc
caggctgattccctggaagtggtcctcgccaatctccgagttccttcgaaaagcaatacg
gctaaagtgtatattgaaattcaggatgaaaatgatcatcccccagtgtttcagaaaaaa
ttctacattggaggtgtgtctgaagatgcaagaatgtttacttctgtgctcagagttaag
gctactgacaaagatactggcaattatagtgccatggcataccgactcatcattccacca
attaaagagggaaaagaaggatttgtggtagaaacatacaccgggctcatcaaaaccgct
atgcttttccacaacatgagaaggtcctacttcaaattccaagtcatcgcaactgacaac
tatgggcaggggctaagtggcaaggcagatgtgctggtctctgtggtcaaccagctggac
atgcaggtgatcgtttcgaacgtgcccccgactctggtggagaaaaagatagaagacctt
acagagattttggatcggtatgttcaggagcaaattcctggtgccaaagtggtggtggag
tccatcggtgctcgcaggcatggggatgccttttcgctagaagattacaccaaatgtgac
ctgactgtctatgcgatcgacccccaaaccaacagagccatcgacagaaatgagcttttt
aaatttttggatggcaaactgcttgatatcaataaagactttcagccgtattacggcgaa
ggaggacgtattctggagatccggaccccggaggcagtgaccagcattaaaaagcgagga
gagagcctaggctatacagagggggccctgcttgcactcgccttcatcatcatcctctgc
tgtatccctgccatcttggtagttctggtcagctacagacagtttaaagtaccccaagcc
gagtgcaccaagacagcgcgaatccagtcggcattacccgcagcnnnnnnnnnnnnncct
gtggccgcgcccccgccgcccccgccgccccccggggcgcacctgtatgaggagctggga
gacagcaccatgcataagtatgagatgcctcagtatggaagccgtcgccgtctcttaccg
ccagctggaccagaggagtatggtgaggtggttggtgaagccgaggaagaatatgaggag
gaagaggaaaaggcagagaaaattaaaaaacctaaagttgaagtcagagagcctagtgag
gaggaggaagtggtcgtcaccatcgagaagccaccgctggccgagcctcccggcaccacg
tgggagagggccaggatattccccatgatcttcaggaaagttagagggctggccgagagg
aggggcgtcgtggacctcgagagtgaagagtggcagcgacgccttgaggaagcggacaag
gattatctgaagctcaccctggaccgagacgaggccacagagagcacggtggagtcagag
gaagaatcctcgagcgactacacagagtacagcgaagaggagtcggagttcagcgagtcg
gagacgccctcggagggggagtctgagtcggagacgccctcggagggggaggaggaggag
agctctacccctgaatccgaagagtcggagtccacagagtcagaaggagagaaggccagg
aagaacatctttcttgccagaagaaggccggttgtcgaggaggtcaaggaggtcaaaggc
aggaaacgggagccccccgaagagcccgaggaggagcccagggaggaggaggagggggag
gaggaggagggcgggccagcaggaggggagagcgagctggcctccgtggacgagccggca
gacctggaggtcaccgaggaggggagcgcagaggcggccccgggggaagagggctcggcc
agcgaggaggagtccgagccggccagtagtgttagcagcagcagcgagagccagtctgga
gggccctggggcttccaggtgccagagcaggacagcagcagggacgcgcgccgggacagg
cgtccgggaggctccgagggctacgacacggccctctga
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integrated database retrieval system
