Providencia stuartii 2017-45-35: OI982_14065 Help Entry OI982_14065       CDS       T09168                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ptha  Providencia stuartii 2017-45-35 Pathway ptha03030   DNA replication ptha03410   Base excision repair ptha03420   Nucleotide excision repair ptha03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ptha00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OI982_14065 (ligB)    03410 Base excision repair     OI982_14065 (ligB)    03420 Nucleotide excision repair     OI982_14065 (ligB)    03430 Mismatch repair     OI982_14065 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ptha03032]     OI982_14065 (ligB)    03400 DNA repair and recombination proteins [BR:ptha03400]     OI982_14065 (ligB) Enzymes [BR:ptha01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      OI982_14065 (ligB) DNA replication proteins [BR:ptha03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      OI982_14065 (ligB) DNA repair and recombination proteins [BR:ptha03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      OI982_14065 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      OI982_14065 (ligB)    MMR (mismatch excision repair)     DNA ligase      OI982_14065 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       OI982_14065 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase Motif Other DBs NCBI-ProteinID:  WIJ72628 LinkDB All DBs Position 2898504..2900216 Genome browser AA seq 570 aa AA seqDB search MQKGFVQEKRGRAAQYVFVVLSFYCSYVSADATRLFYPHQCSTLSQDELKKESQKLGEQL QQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQLPPIHLPPHSRTVKHPIVHTG LKKLNEVDIGKWIDTREEVWLQPKVDGVAISLVYQQGKLVSMISRGNGIEGLEWRDKADF IPAIPKQLPTSQPQLILQGELFWRLKDHRQQASGGVNARNQVAGWLMRKSKPVTPEANID VFIWAWPEGVGKAEEQWRQLANLGFPLTQQYSHKVTTMAQVKKWQSYYYQQPMPFATDGI VLKSFPTPRVAAWQVNHNSWSVAWKHPYARIASKVTNLHFRVRRTGAVSVVAEIEPVELD SKKVSRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKLESVIWRLQQRTYPDLSQFKQFH ALSCFVMTPQCEQQFVARLNWLGKQLKIKGISEATWREWAEHYHLNKLTTWLSPSWQTSL PNTKKTKKIIEQFRLVGQQPLMNWLKGLGIPLKDKHLSLITELSLLNNTLFLEGLGLSII QKTKLNQWLSTPDIKEIFQVIDEIRNGPSI NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt atgcaaaagggatttgttcaggaaaaaagagggcgggctgctcaatacgtctttgtggta ctgagtttttactgtagctatgtgtcagccgacgcaacacggcttttttatccccaccaa tgctcaacattgagtcaggatgagttaaaaaaagagagccagaaattgggcgagcagttg cagcaatggaaccgtctataccgtttatcggggaatagccccgtaacagatgaaacatat gatcaactgctgaatacatggcaacaatggcaaaagtgccaaaatttgtctgggcaatta ccgcctatccatttgccacctcattcgcgcacagtcaagcatcctattgtgcatacgggc ttaaaaaaattaaatgaagtggatattggaaaatggatagatacacgggaggaggtctgg ctacaaccgaaggttgatggcgttgccatttcgttggtttatcaacaagggaaattggtt tcaatgatcagtcgtggaaatggtattgaggggcttgaatggcgtgataaggcggatttt attccagctatccccaagcaactaccgacatcacaaccacagcttatattacaaggagag ctattttggcggctaaaagatcataggcaacaagccagtggtggggttaatgccagaaat caagttgcagggtggttaatgcgcaaaagtaagcctgtaacccctgaggccaatattgat gtctttatttgggcatggccagagggagtggggaaagccgaagagcaatggcggcaactg gcaaatttagggtttccacttactcagcaatatagccataaagtcacgactatggcacaa gtgaaaaaatggcagtcctattactatcaacagccgatgccttttgcgacagacggtatt gtacttaagtcatttccaacgccacgggtagcggcatggcaagtgaatcacaacagttgg tctgtagcttggaagcatccttatgctcgaatcgcctcaaaagtgactaacctccatttt cgcgtgaggagaacgggggctgtgagtgtggtggcggaaattgaacctgttgaactagat agtaaaaaggtgagtcggctctatttaggctcattgaaatcatggcagaaaaaggatctg ctggttggtgatactattcaagtggcactagcggggcatggtattccaaaacttgaatcg gtaatttggcgccttcaacaacgcacctaccctgacttatctcagtttaagcagtttcac gctttaagctgttttgtaatgactcctcagtgtgagcagcagtttgttgctcgtttaaat tggctaggcaagcaattgaagataaaaggaattagtgaagctacttggcgtgaatgggca gaacattaccatctgaataagctgacaacatggttatctccaagttggcaaaccagtcta cccaatactaaaaaaaccaagaaaatcattgagcaatttaggctggtggggcagcaacca ctcatgaattggctaaaaggcttagggatccctttaaaagataaacatttatcattaatt acagaattaagcctattaaataatacgctttttttagaggggttaggtttgtctatcata caaaaaacaaagcttaatcaatggctttcaacaccggatatcaaagagatatttcaggtt attgatgagataagaaacgggccatcaatctaa

DBGET integrated database retrieval system