Pseudodesulfovibrio thermohalotolerans: LF599_08660
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Entry
LF599_08660 CDS
T09613
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe01501
beta-Lactam resistance
pthe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LF599_08660
01503 Cationic antimicrobial peptide (CAMP) resistance
LF599_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pthe03036
]
LF599_08660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pthe02000
]
LF599_08660
01504 Antimicrobial resistance genes [BR:
pthe01504
]
LF599_08660
Chromosome and associated proteins [BR:
pthe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LF599_08660
Transporters [BR:
pthe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LF599_08660
Antimicrobial resistance genes [BR:
pthe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LF599_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
HH_YBHG
BSH_CzcB
HH_CzcB
HH_AprE
BSH_CusB
CzcB_C
GreA_GreB_N
SbsC_C
Paralemmin
YnfE
Motif
Other DBs
NCBI-ProteinID:
WFS64214
LinkDB
All DBs
Position
complement(1840358..1841566)
Genome browser
AA seq
402 aa
AA seq
DB search
MAPYGVMNNTARFKLLSTLLLAVLLLGCNGDADTAMPAPTSRQVSTITIHRQKVTLTREL
SGRTTPFRIAEIRPRISGLIQRRLFTEGSDVKEGEILYLIDPAPFQAEYNNALAGLKQAQ
AQLQSVGSKAERYEKLLEAKTVSQQDYDDAASALNELNARIRSLQASLEVARINLGYTKI
TAPIPGRIGKSSVTDGAIVTAYQNTALTSIQQLDPIYVDVPQSTTELLRIRNGVGKGKFK
SNSQHPAVQLILEDDALYPHEGRLQFSDVTVDQTTGTVTLRAIFPNPDKTLLPGMFVKAV
LQEGVDEQALLIPQQGVSRDHRGEPFAMVVDEGSKAQRRPLVLGRAIGDKWLVISGLAPG
DRVIVEGLQRLQPGTEVTASPFDSPKDPPADAQPRKSRPGEE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccccatacggcgtaatgaacaatacggctcggttcaagctgctctcaacactgttg
ctggccgttctgctcctcggatgcaacggcgatgcggatacggcgatgcccgcaccaaca
agtcgccaggtcagcacgatcacaatacacaggcagaaagtcacgctgaccagggaactt
tccggacgcaccaccccctttcgtatcgcggagattcgtccgcgcatcagcgggttgatt
cagcggcgcctgttcacggaaggttccgatgtcaaggaaggagagatcctctatctgatc
gaccccgctccctttcaagcagagtacaacaacgcgctagcgggactcaagcaggctcag
gcccaactccagtccgtaggctccaaggcggaacgctacgaaaaacttttagaagccaag
accgtaagccaacaggattacgatgatgccgcctccgccctgaatgaactcaacgccaga
atcaggtcattgcaggcatccctggaagtcgcccgcatcaacttgggatacaccaaaatc
accgcccccattcccggccgcatcggcaagtcttccgtcacggacggggccattgttacg
gcctatcagaataccgccctgacctccatccagcagctcgaccccatttatgtggacgtc
ccccagtccaccacggagctgctgcgcatcaggaacggcgtcggcaaggggaaattcaaa
tcgaattcgcagcaccccgcagtccaactcatcttggaagacgacgcgctttatccccac
gagggaaggttgcagttcagcgacgtcacggtggatcagaccaccggcacggtgacccta
cgagcgattttccccaatccggacaaaacgctgctgcccggcatgttcgtcaaggcggtg
ttgcaggaaggcgtcgacgaacaggccctcctcattccgcaacaaggcgtgtcgcgcgac
caccgaggtgagcccttcgccatggtggtcgatgaggggagcaaggcgcaacgacggccc
ctggtcctgggccgggccattggcgacaaatggctcgtgatctctggcctggccccggga
gatcgggtgatcgtcgaaggattgcaacggttgcaaccgggtacggaagttacggcctct
ccttttgattcaccgaaagacccgcctgccgacgcacagccccgaaagtcgcgtccggga
gaagaatga
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