Pseudodesulfovibrio thermohalotolerans: LF599_10195
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Entry
LF599_10195 CDS
T09613
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF599_10195 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthe03400
]
LF599_10195 (nth)
Enzymes [BR:
pthe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LF599_10195 (nth)
DNA repair and recombination proteins [BR:
pthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF599_10195 (nth)
Prokaryotic type
LF599_10195 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
TPR_6
Motif
Other DBs
NCBI-ProteinID:
WFS61052
LinkDB
All DBs
Position
2136884..2137519
Genome browser
AA seq
211 aa
AA seq
DB search
MNKKERAAEIFDRLSKRYPSPKPALSYSTPWELLVATALSAQCTDERVNKVTPVFFERWP
EISDAAEADVTEIEEVVRSTGFFRNKAKNIKAAAQRIMSEYDGEVPRTMAELTTLGGVAR
KTASIVLSNAFGVNEGIAVDTHVKRLAFRMGLTDKTDPIRVEKDLMPLFPRDQWGDVNHS
LVFFGREICPARKPKCDICELADICPKKGVE
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaagaacgcgcggctgaaattttcgaccgtctctcgaaacggtacccctcc
cccaaaccggccctcagctacagcactccatgggagctgctcgtggccacggccctgtcc
gcacagtgcacggacgagcgggtgaacaaggtcaccccggtcttcttcgagcgttggccc
gaaatctcggacgccgccgaggccgacgtgaccgaaatcgaggaagtggttcgctccacc
ggattcttccgcaacaaggccaagaacatcaaggccgcggcacaacgcatcatgagcgaa
tacgacggcgaggtgccgagaaccatggccgagctgacgacccttggcggcgtggcccgc
aagacggcgagcatcgtgctctccaacgccttcggcgtgaacgagggcatcgcggtggac
acacacgtcaaacggctggccttccgcatgggactgacggacaagaccgatccgatccgg
gtcgagaaagacctcatgcccctcttcccgcgcgatcaatggggcgacgtcaaccattcc
ctggtcttcttcggccgggaaatctgtcctgcccgtaaacccaaatgcgatatctgcgaa
ctggccgacatctgtccgaaaaagggagtcgaataa
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