Pseudodesulfovibrio thermohalotolerans: LF599_12785
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Entry
LF599_12785 CDS
T09613
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe01501
beta-Lactam resistance
pthe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LF599_12785
01503 Cationic antimicrobial peptide (CAMP) resistance
LF599_12785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pthe03036
]
LF599_12785
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pthe02000
]
LF599_12785
01504 Antimicrobial resistance genes [BR:
pthe01504
]
LF599_12785
Chromosome and associated proteins [BR:
pthe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LF599_12785
Transporters [BR:
pthe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LF599_12785
Antimicrobial resistance genes [BR:
pthe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LF599_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_CusB
YknX_C
BSH_RND
Beta-barrel_RND_2
Biotin_lipoyl
HH_YBHG
BSH_YknX
BSH_YhbJ
HH_MFP_RND
BSH_LcnD
HH_CzcB
PASTA
Beta-barrel_ALG44
Motif
Other DBs
NCBI-ProteinID:
WFS61539
LinkDB
All DBs
Position
complement(2697943..2699013)
Genome browser
AA seq
356 aa
AA seq
DB search
MKRFLKSAVVFCLAVLLAVPALAQAPGASPASPVVTAKVTCGDMAPHIEFIGTVYFTETS
NVAAEVEGKVVSLDVEDGQRVAKGDPLVVLSSDILDSSIANARALVDQAQADYELAKLEN
ERTTKLFKSRTVAEGEYDDKRLSALSAEKNMIAARAILNRLLTERGKKTIRAPYDGVVLE
RRAFRGDWVSVGATVAVMAADKDFDVVVNAPREAFGVVKPGLKVTVKVAGRDVEGSVFAA
IPKGDVATRTFPVKIRVHNDGFLAEGMEARVVLPKGLGGKTLIVPRDAIISSRGQMVVWA
VVDGKADPMPVYVVGYRGMEAGVKSKTLREGMDVVVKGNERLQPQQPVAAQPAGLP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattcctgaagagtgcggtagtcttttgcctagcggtcctgctggccgttccg
gccctggcccaggcgccgggtgcgagtcccgcgtcccctgtggtcacggccaaggtgacc
tgcggcgacatggctccccatatcgaattcatcggcacggtttatttcacggaaacttcc
aacgtggccgccgaggtcgagggcaaggttgtgtccttggacgtggaggacggccagcgc
gtcgccaagggcgatcccctggtggtcctttcttcggacattctggacagtagcatcgcc
aacgctcgagccctggtggatcaggcccaggccgactacgagctggccaagctcgaaaac
gagcggaccaccaaattgttcaagagccgcaccgtggccgagggcgaatacgacgacaag
cggctgtccgccctgtccgccgaaaagaatatgatcgccgcccgggccattcttaaccgg
ctgctcacagagcgcggcaagaagaccatccgcgcgccctacgacggcgttgtcctggag
cgcagggcgtttcggggcgactgggtctccgtgggcgccaccgtggccgtcatggccgcg
gacaaggatttcgacgtggtggtcaacgccccgcgtgaggccttcggcgtggtcaagcct
ggcctgaaggtgaccgtcaaggtggcgggccgtgacgtggagggttcggtctttgcggcc
attcccaagggcgacgtggctacgcgcacctttccggtcaagattcgcgtgcacaacgac
gggttcctggccgagggcatggaggcccgggtggtcctgcccaagggattgggcggaaag
accctgatcgtgccgcgcgacgcgatcatctcctcccgcgggcagatggtcgtctgggcc
gtggtggacggcaaggccgaccccatgcccgtgtacgtggtcggctaccggggcatggag
gccggggttaagtccaagaccctgcgggagggcatggacgtggtcgtcaagggcaacgag
cggctccagccgcaacagcccgtggctgcgcaacccgccgggctgccctag
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