Paenibacillus thiaminolyticus: NDS46_12320
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Entry
NDS46_12320 CDS
T08812
Symbol
vanT
Name
(GenBank) serine racemase VanT catalytic subunit
KO
K18348
serine/alanine racemase [EC:
5.1.1.18
5.1.1.1
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi01502
Vancomycin resistance
pthi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NDS46_12320 (vanT)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NDS46_12320 (vanT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pthi01504
]
NDS46_12320 (vanT)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NDS46_12320 (vanT)
5.1.1.18 serine racemase
NDS46_12320 (vanT)
Antimicrobial resistance genes [BR:
pthi01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
NDS46_12320 (vanT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Acyl_transf_3
MatB
Motif
Other DBs
NCBI-ProteinID:
WCF10573
LinkDB
All DBs
Position
2727083..2729227
Genome browser
AA seq
714 aa
AA seq
DB search
MTANAQFAGLDRFKIVAALLVIAIHTGPLISYSPYADFVLTGIAARVAVPFFFIASGFLF
FRKLTGEKARDRGLLHRFMRRIGLLYAVSIVLYLPLNAYAGYFGEKDFDVMSFLRDLVFN
GTFYHLWYLPALILGTYITYFLYRALPLQGMLAAAGLLYIAGLLGDSYYGVTEQLPVLRS
AYAGMFTWFDYTRNGIFFAPIYIALGAWTAARSVRIRSAAAGAGLLLLSLTLLFLEGMAL
HAYGWPRHDSMYVFLVPAVYAGFLLLLRETGVSGKALREMSTWIYILHPWAIVLVRGAAK
LAGLTPILVGDSLVHYGAVAALSVMMSFGVVFFLRRLQQSAPDPRRRAWAEIRLDDVTHN
VRELRGLLPPDCELMAVVKADAYGHGSIPVARHLSRIGVRHFAVADVEEGIALRREGIKG
EILVLGYTSPARFGDLARYQLSQTVISADYGKALNAVGKPMNVHIKIDTGMSRLGERWTD
TEAIRSMYRLRNLRVTGTFTHLSCSDSLAEADIAFTNAQIKRFGETIDEIKAAGLDPGTL
HMQSSYGIVNYSDLRCGMARPGIALFGLLGTELDQAQAPIDLRPALSWRARVTLVKQMQA
IEPVGYGRNYTTRPGSVIATVSIGYADGVPRVLAEKGGAVLIRGHRAPIAGNICMDQLMV
DVTHIEGVQEGDTVTLIGQDGQASITAGEMARRCGTITNEIVSRIGQRVDRIYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgacggctaacgctcaatttgccgggctcgaccgcttcaagatcgtggccgccctgctg
gtcattgccattcatactggtccgttgatatcgtacagcccttatgccgattttgtgttg
accggcattgcggcgcgtgtagccgtgccgtttttctttatcgcatcagggtttttgttc
ttccgcaagctgacgggggagaaggctcgggatcggggcctgctgcatcgctttatgcgc
cgaatcgggctgctgtatgcggtgtccatcgtactgtatttgcctttgaacgcgtatgcg
ggttactttggggagaaggatttcgatgtaatgtccttccttcgggaccttgtgttcaat
ggcacattctatcatttatggtatcttcccgcgctgattctcgggacatacatcacgtat
tttttgtatcgagcactgccgttgcaggggatgctggccgcggccgggttattgtacatc
gccggtctgctgggagacagctattatggcgtaacggagcagcttccggtactgcgttcc
gcgtatgcggggatgttcacctggttcgattacacccgcaacggcatctttttcgctcca
atatatattgcgctcggcgcatggacggcagcgcgctctgtccgcatccgctccgccgcg
gcgggcgccggccttctgctgctgtcattgacccttctgttcctggaggggatggccttg
catgcatacggctggccgcgccatgacagcatgtacgtatttctcgtgccggccgtatac
gccgggttcctgctgctgctgcgggagacgggcgtgagcggcaaggcgctgcgggagatg
agcacgtggatctatatattgcacccgtgggccatcgtgctcgtacgcggagcggccaag
ctagccggccttacgccgatcctggtcggggacagtctcgttcattatggggcggtcgca
gcgctgtcggttatgatgtccttcggcgttgtcttcttccttcgccgcttgcagcaatca
gcgccggatccgcgccgccgggcatgggcggagatacggctggatgatgtgacgcataac
gtgcgggagctgcgcggactgctgccgcccgattgcgagctgatggccgtcgtcaaggcg
gatgcttacgggcatggcagcattccggtggccagacatttaagccgcattggcgtgcgt
catttcgcggtggcggacgtggaggaaggaattgcgctgcgccgagaaggcatcaaggga
gaaatattggtactcggctatacctctcccgcgcggttcggtgatctggctcgttaccag
ttgtcgcagacggtcatcagcgccgattacggcaaagcattgaacgcagtcggcaaaccg
atgaacgttcatattaagattgataccggcatgagccggcttggcgaacgttggaccgat
acggaagcgatccgttcgatgtatcggcttcgcaacttgcgggtcaccggaacgttcacg
catttgtcttgctccgacagcctggcggaagcggatatcgcgttcacgaatgcccaaatc
aagcgatttggggagacgatcgatgagatcaaggcggccgggctggacccgggcacactg
catatgcagagcagctacgggatcgtcaattattcggatctgcgctgcggcatggcccgt
ccgggcattgccctgttcggcctgctcggcacggaactcgatcaggcgcaagcgccgatc
gatctgcgtccggcactgtcgtggagggcgagggtgaccttggtcaagcagatgcaggca
atcgagcctgtcgggtacgggcgcaattacacgaccaggccgggcagcgtcattgcgacg
gtgtcgatcggctatgcggacggcgtgccgcgagttctcgcggagaaggggggagcggtt
ctcattcgaggccacagggcgccgatcgcgggcaacatttgcatggatcaattgatggtg
gatgtgacgcatatcgagggggttcaggaaggggatacggtaacgctgatcggacaagac
gggcaagcatccattacggcaggcgagatggcgcgccgctgtggaacgataacgaacgag
atcgtgagccgcatcggccagcgagtggacagaatctatctctag
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