Paenibacillus thiaminolyticus: NDS46_17460
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Entry
NDS46_17460 CDS
T08812
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDS46_17460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_17460 (nth)
Enzymes [BR:
pthi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NDS46_17460 (nth)
DNA repair and recombination proteins [BR:
pthi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDS46_17460 (nth)
Prokaryotic type
NDS46_17460 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_8
EndIII_4Fe-2S
RecR_HhH
HHH_5
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
WCF11227
LinkDB
All DBs
Position
complement(3849047..3849667)
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AA seq
206 aa
AA seq
DB search
MYPDAHCELIHSNPFELTIAVLLSAQCTDETVNKVTADLFRKYKRPEDYLAVPLEELQAD
IRRIGLYRNKASNIQKLCRMLLDKYDGEVPREHAQLTELPGVGRKTANVVVSNAFGVPAI
AVDTHVERVAKRLKLADEQDSVLEVEKKLMRKVPRDEWTLTHHRLIFFGRYHCKAQSPRC
EICPLIDCCRVGKARMKATKPRKTGK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtatccggatgcgcattgcgagttgatccattccaatccgttcgaattgacgattgcc
gttctgttgtcggcccaatgcacggacgagaccgtcaataaagtaaccgcggacttgttc
cggaagtataagcgccccgaggattatttggcggtgccactggaggaactgcaggcggac
atccggcggatcgggctgtaccgcaacaaggcaagcaatatccagaagctgtgccgtatg
ctgctcgacaagtatgacggcgaggtgcctcgggagcatgcccaattaaccgagcttccc
ggtgtcgggcgcaagacggcgaatgtcgtcgtctccaatgcgttcggcgtgccggcgatc
gcggtggacacgcatgtggagagggtagccaagcgcttgaagctggccgatgaacaggac
agcgtgctggaagtggagaagaagctgatgcgcaaagttccgcgggacgaatggacgctt
acgcatcaccggcttatattttttggacgttatcattgcaaagcgcagtcgccccggtgc
gagatttgtcctctcatcgattgctgccgcgtgggaaaagcacgtatgaaagcgaccaaa
ccaagaaagactggaaaataa
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