Phaeodactylum tricornutum: PHATRDRAFT_17198
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Entry
PHATRDRAFT_17198 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_17198
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_17198
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_17198
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PHATRDRAFT_17198
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PHATRDRAFT_17198
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PHATRDRAFT_17198
Prokaryotic type
Other AARSs
PHATRDRAFT_17198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
7196045
NCBI-ProteinID:
XP_002176534
JGI:
17198
UniProt:
B7FRF4
LinkDB
All DBs
Position
1:167825..171576
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AA seq
1052 aa
AA seq
DB search
MRIGLVPMTLFSLLASSVCQNHRGTVTAFSNTARTLTRRSTVARSAKDGGGGGAKKPKNA
YAPTIVLPETAFSQRANAVIREPELQALWKETNLYHKLSSQAKEAGAERFVLHDGPPYAN
GDLHCGHALNKILKDFINRKQILNGKQVHYIPGWDCHGLPIELKVLQTMKSKEREALTPV
TLREKAAEFAKETVEKQSVAFQRYGIFGDFEKPYLTLQPEFEAAQIRVFGEMFQKGYIFR
GRKPVHWSPSSRTALAEAELEYPEGHVSKSIYVAFNVDTPSEVLASFHSTEEPLKVAIWT
TTPWTMPANMAVAVNPELSYSVVQHEKTGKLLVATDLASSLARKFDLPEDETLDILATFP
GKDLVGTIYKHPMYDRKSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLEILSP
VDDVGKFTIEAGERYVGMRVLAEGNLAMIDALQEAGSLLKAEDYGHKYPYDWRTKKPTIF
RATDQWFASVAGFRDQALDAVEKVKWVPEVGKNRIRSFVDGRGDWCISRQRSWGVPIPVF
YDKATGKEVLLNKDTLAHVQTLFAEHGSDCWWKMDESELLPEKFRAEADKWQKGTDTMDV
WFDSGSSWAGVAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGF
VLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQDPAYGADVLRLWVANSDYSGDVLIGDNII
KQTFDSYRKLRNTARYLIGNLADFVPSDSTDSNAVAYDDLPSMDKWMLGRLSAVLRTVNE
AMDDFQYQRAIQELLRFASADLSNFYLDVAKDRLYISAMDDARRRSCQTVLYACLEGFTK
AISPILPHMAEDIWQNLPYQKSTDSVFEGGWPTNLMSYAEFDSQTWDLVRLVRDDVNKML
ESARSDKLVGASLDAAAYIYVPDSEKKAILEKLVGDASLVAPPVKTNGVDELRTALMLSQ
IHLVENENDVREACEDKYVSSRDTSSGCIVGVGRAVGTKCARCWFYDEEVGNHSLTYADV
CQRCNEAISSWEKKTGQAFVKPEETEAEQPVA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcggtttggtcccgatgacgctgttttctttgctcgcgtcgtccgtttgccag
aaccatagaggaaccgtcacggccttttcgaatactgcccgtaccttgacgcgtcgttcc
accgtcgctcggagtgccaaagacggcggaggcggcggcgccaagaaacccaagaatgcg
tacgctcccacaatcgtcttgcccgaaacagctttttcccaacgggccaacgcggtcatc
cgcgagcccgagttgcaagcgctctggaaagaaacaaatttgtaccacaaactctcgtcg
caagcgaaagaagccggcgccgaacggttcgtcttgcacgatggaccgccctacgccaat
ggcgatttgcactgcggacacgcactcaacaaaattctgaaggatttcatcaaccgcaaa
caaattctcaacgggaaacaggtacactacattccgggttgggattgccacggtttgccc
attgaactcaaagtcctgcagaccatgaaatccaaagaacgcgaggcgcttacaccggtc
accttgcgcgaaaaggcggcagaattcgccaaagaaacggtagaaaaacaaagcgtggcc
tttcaaagatacggaatctttggcgacttcgagaaaccgtacttgaccttgcagccagag
tttgaagccgcacaaattcgagtctttggagagatgttccaaaaaggttacatttttcgg
ggtcgaaaaccggtacactggtcgccgtcgtcacggacagctctggcggaagccgaattg
gagtatccggaagggcacgtatctaagagtatttatgtggcctttaacgttgataccccg
tcggaagtcttggcgtcgtttcattccaccgaagagccactcaaagtggccatttggacc
accacaccgtggacaatgccggcgaacatggccgtggccgtcaacccagaattgagctac
tcagtcgtacaacacgaaaagacagggaaactgctagttgccacagacttggcgtcaagc
ttggctcgcaagtttgatctgccagaagacgaaaccttagacatcctcgcaacgtttcct
ggaaaggatctcgttggtaccatctacaaacacccaatgtacgatcgaaagtctccggta
ctggcgggtggggactacattacgactgaatcgggtacaggtttggtacatactgctccg
ggtcatggacaggaggattacttgaccggtcttaagaacggactggagattctgagcccg
gtggatgatgtaggaaaattcaccatagaagctggcgaaagatatgttggcatgcgtgtg
ctcgcggaaggaaatttggcaatgattgatgcattgcaagaagctggctcgctgctcaaa
gcagaagattacggccataaatacccttacgattggcgaaccaaaaagccgaccatcttc
cgtgcgaccgaccagtggtttgccagtgtggcaggtttccgggaccaggctttggacgcc
gtcgaaaaggtcaaatgggtccctgaggttggaaagaatcgtattcggtccttcgtcgat
ggccgtggcgattggtgcatttctcgtcaacggtcgtggggtgtccctattcccgtcttc
tacgacaaagcaactgggaaagaagtcctactgaacaaagatactttggcacacgttcaa
acattgtttgctgagcacggcagcgactgctggtggaagatggatgagagcgaacttctt
ccagagaaatttcgtgcggaagccgataagtggcagaagggaaccgatacaatggatgtt
tggttcgactccggttcgagttgggctggtgtagcccagtcacgcgacgaactcgcatat
ccggccgatatgtacctggaaggaagtgatcagcaccggggctggtttcagagtagcttg
ttgactagtgtcgcaaacaacaatattgccccgtacaagactgtcctcacgcacgggttt
gttttggacgaaaaaggttttaaaatgtctaaatctctcgggaatgttgtcgatcctttg
aaggttatcgaaggaggtaacaacaaaaaacaagacccagcgtatggggctgatgtgctt
cgtttatgggttgccaacagcgactactctggtgatgttttgattggagacaacattatc
aagcagactttcgatagttatcgcaaactccgaaacactgctcgctatctaatcggaaac
ttggccgattttgtgccgagcgactcaacagacagcaacgctgtagcctacgatgacctt
ccttccatggacaagtggatgctcgggcgattgagcgcagtgctaagaactgtaaatgaa
gcaatggacgatttccaataccaacgcgcaattcaagagttgcttcgttttgcttcagct
gatctctctaacttctacctggatgttgctaaggatcgtctctatatctcggcaatggat
gatgcacggcgacgaagctgtcaaacagttctttacgcgtgtttagaggggttcactaag
gccatctcgccaattttaccacacatggcggaagatatatggcaaaatcttccctaccaa
aaatcgacggatagtgtcttcgaagggggctggccgacaaatcttatgtcatatgcagaa
tttgattctcagacctgggatctagtccgtttggtaagagacgatgtcaacaagatgctt
gagtctgctcgaagtgacaagcttgttggagcgtcccttgatgcggctgcctacatatac
gttccggattctgagaagaaagcaatcttggagaagcttgttggagatgcaagccttgtc
gctccaccagtcaagaccaatggtgtggatgagcttcgtacagctttgatgctgtctcaa
atccatctggttgaaaatgaaaacgatgttagagaggcctgcgaagacaagtatgtgtct
tccagagatacctcgagcggctgtattgtcggagtggggagggcagttggaacgaaatgt
gctcgttgctggttctacgatgaggaagttggaaaccacagtcttacgtacgcggacgtt
tgtcaaagatgcaatgaagccatttctagttgggaaaagaagactggacaagctttcgtg
aaaccggaagaaacggaagctgagcaacctgttgcataa
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