Phaeodactylum tricornutum: PHATRDRAFT_26649
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Entry
PHATRDRAFT_26649 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00450
Selenocompound metabolism
pti00970
Aminoacyl-tRNA biosynthesis
pti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PHATRDRAFT_26649
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_26649
Enzymes [BR:
pti01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
PHATRDRAFT_26649
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
7199666
NCBI-ProteinID:
XP_002179089
JGI:
26649
UniProt:
B7FV74
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Position
5:complement(918953..920755)
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AA seq
512 aa
AA seq
DB search
MNSVDELTTALTALHIPSTHVTVGVANLIASHKDLRTLLVNRRLPEHGWSDVQIQHVLYT
MATLDTNNKRSGSSSSDDSGSSRWCGVGEREGRVYSALVSSRHFGLSHGVGRSGDIAEPQ
PKALGSTVLAKLTLCLVLDAVRRGSGLHPQTAAKSGILLPLCTGMSMALVLGTLRQLQDN
HQTSANAAIKPYRNIVLWSRIDQKSCFKAIQSAGLECVVVPTRLAGDAVVTDLDAFQASL
LTYGDRVLAVVTTTSCFAPRVPDQVDAVARLCAEQCVPHVINNAYGLQSSDTSKLLNRAC
AVGRVDAIVCSTDKNFMVPIGGAIVLSPDESLIQNVGKVYAGRASASPMLDLFITLCSMG
LRGYQQLLTSRRILLPTFTERLKEVANKYGERVLECRTNCISFGVTLDGLVRPPRQDEDD
VAYRTSVSRDVSSLGAMLFQRCVSGTRVVPRGTVQRMGGMEFCGFGSSHDAYPHAYLTAA
CAIGLTASEGDDFFTRLDQTLHEFQKRQRRRA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtagatgagttgacgacggccttgacggctctgcacattccgtcgacacac
gtgacggtgggcgtggccaacctgattgcgtcgcacaaagacttgcgcaccttgctcgtc
aaccgtcgattgccggaacacggttggtcagacgtccagatccaacacgttctgtatacc
atggcaacgttggatacgaacaacaaacgcagtggcagcagcagctcggacgattccggt
tcgtcccggtggtgtggagtcggcgaacgcgaaggacgcgtgtacagtgccctcgtctcg
tcccgccatttcggtctaagccacggcgtgggacgctccggagacattgccgaaccgcaa
cccaaagcactggggtcgaccgtcctcgccaaactcacgctgtgcttggttctggacgcg
gtccggcggggtagtggactgcatccgcaaacggccgccaaatccggtattctcctaccg
ctctgtaccggtatgagtatggcgctcgtgctcggtacgctgcggcaactacaagacaac
caccaaaccagcgcgaatgctgcaataaaaccgtacagaaatattgtcttgtggagtcgg
attgatcaaaagagttgtttcaaggcgatccagtcggctggcctggagtgcgttgtcgtg
ccgacgcgattggcaggtgacgcggtcgtgacggatttggatgccttccaggcgtctcta
ctgacttacggagaccgcgttctggccgtcgtgaccacaacgtcctgctttgcaccgcgg
gtgcccgaccaagtggacgccgtggccagactgtgcgccgaacaatgtgtaccgcacgtc
atcaacaacgcgtacgggttgcaaagctccgatacgtccaaactcctcaatcgggcttgc
gcagtcggtcgggtggatgcgattgtgtgttcgaccgacaaaaactttatggtgcccatt
ggtggtgcgattgttctgtcaccggacgaaagcttgatccagaacgtgggcaaggtatac
gccggtcgtgcgtcggcttcacccatgctggatttgttcattacgttgtgctccatgggt
ctacggggctatcaacaattactgacgtcccggcgcatactactccctacgttcacggag
cggttaaaagaagtcgcgaacaagtacggtgaacgggtcctggagtgtcggacgaattgt
atcagttttggagtcactttggatggcttggtccgtccaccacgccaagacgaggacgat
gttgcgtatcggacgagtgtgagtagggacgtatccagcttaggtgctatgctgttccaa
cggtgcgtgagcgggacaagggtggtaccccggggcacggtgcagcgcatgggcgggatg
gaattttgcggttttgggagtagtcacgatgcctatccacacgcctacttgacggcggcg
tgtgcgattggactgaccgcgtccgaaggagacgacttttttactcggctcgatcaaacg
ctgcacgaatttcaaaaacgacagcggcgtcgcgcttga
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