Phaeodactylum tricornutum: PHATRDRAFT_29016
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Entry
PHATRDRAFT_29016 CDS
T01075
Symbol
OGD1
Name
(RefSeq) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00020
Citrate cycle (TCA cycle)
pti00785
Lipoic acid metabolism
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01200
Carbon metabolism
pti01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PHATRDRAFT_29016 (OGD1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PHATRDRAFT_29016 (OGD1)
Enzymes [BR:
pti01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PHATRDRAFT_29016 (OGD1)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
7202926
NCBI-ProteinID:
XP_002182131
JGI:
29016
UniProt:
B7G4T8
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All DBs
Position
14:complement(764420..768156)
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AA seq
1073 aa
AA seq
DB search
MSSARQLLLLLKRPGPCRNRPSPSRRVPDPGTLSRSLSRSRVAQRSLSTSAASSLTVHEN
ESFLTGTSSVYAEEMYEAYLRDPTSVHESWKRYFDNLEQSVAYNEADFASPTAVPSPKPV
RASSMSIEAAPSDSLAVAHLIRSYQVNGHLAAQLDPLHLHTREAFPQRPSNLKPELLSKD
GFPPELTAEHYGFTEADMDRRLVFRGASSGGNKGYLEELSNSPNKVTLRMILQELRKTYC
NTLGVEYMHIGDIDKMNWIRERVENPRWTRYDVEKKTHIFERLCFADSFENFLAHKFNTT
KRFGLDGGEAIVPALKDAIDRASELGAHSFVIGMPHRGRLNILANVMRKPMPLIFSEFQG
TNYNIKDHQKSTSDDHWGMSGDVKYHLGSSMDRTYPDGRQIHLSLVANPSHLECVNPVVA
GKARAKQYYGGNREEDIRNVVPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIIN
NQIGFTTNPIHSRSTPYSSDLGKAFNCPIFHCNGDDPLAVSTALETAVEWRHEWGMDVII
EMVCYRRNGHNELDQPAFTQPKLYKEISRHPPTLDIFEKRLIEEGTLSKEECQEIRDFTL
ESYEKDFEASKTYVKKETDWLSSRWTGFKGPSQISRIRPTGVEVETLRKIGIQAGTVPAD
FKLHRQMAKIFKARREMAENGEGIDWGTAEALAFGSLLLEGNHVRITGQDVQRGTFSHRH
AVVKDQNTEEEYTPLNFLAKKMAPSAPLEELSKTDTQAGFIARNSILSEFAVLGFEHGYS
LENPNALILWEAQFGDFVNGAQVLIDQFISSGEDKWLRQSGLVMLLPHGYDGQGAEHSSC
RVERFLQQVDEDPHYIPRLARDERMQIQRCNWQVVNCTTPANYFHCLRRQIHRDFRKPLV
VVAPKNLLRHKRCVSTLEEMGPGTSFKRVYDETDPAISHHPEQVKTLVFCTGQIYYELLA
EREKLGRTDVALVRLEQIAPFAFDRIAKNAQKYPNAELIWAQQEPKNMGAYSYVLARIMT
ATRELNGNEKRPRYVGRPVSAAPATGMGKVHQMEYNNIMAGVYGVAGDGGFED
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcccgacagcttttgctcttgttgaaacgtccaggtccgtgccggaatcgt
ccatctccttcacggcgcgttcctgatcctggcacgttgtcccgatccttgtctcgttcc
cgtgtggcgcagcgaagcctgagtaccagcgctgcctccagtcttaccgtgcacgagaac
gaatcgttcttgacgggaacgtcctctgtctatgcggaagaaatgtacgaagcctaccta
cgcgatcctaccagtgtgcacgaatcatggaaacgctactttgacaatctggaacagagt
gtggcctacaacgaagccgatttcgcgtccccgaccgccgtaccatcgcccaagccagtc
cgggcatcgagtatgtcgatcgaagccgctccgtcggattccctagcggtagcacatttg
attcgatcctaccaggtcaacggacacttggccgcgcaattggatcctcttcatcttcac
acccgcgaggcatttccccaacgcccttccaatctcaagcccgagctactcagcaaggac
ggattccctcccgagcttactgcggaacactacggctttacggaagccgacatggatcgt
cgtctcgtctttcgtggcgcctcttccggtggaaacaagggctacttggaagagctctcc
aattctcccaacaaagtcacgctccgcatgatcctacaggaactgcgcaaaacgtattgc
aacacgctcggtgtggaatacatgcacattggcgatatcgacaagatgaactggattcgg
gaacgcgtcgagaatccgcgatggacgcggtacgatgtcgaaaagaaaacacacatcttt
gaacgtctctgcttcgccgatagctttgagaatttcttggcgcacaagttcaataccacc
aagcgctttggtttagatgggggtgaagccatcgtcccggctctcaaagacgccattgat
cgcgcgtccgagctcggggcgcacagtttcgtcatcggcatgccccaccgcggtcgactc
aatattctcgccaacgtcatgcgcaaacccatgccccttatcttttccgaattccaaggc
accaactataatatcaaagatcaccaaaagagtacatcggatgatcactggggtatgtcg
ggtgacgtcaagtaccatttgggttcgtcaatggaccggacctatcccgatggtcgacaa
attcatctaagtttggtcgccaatccatcacatttggaatgcgtcaacccggtcgtggcg
ggtaaggctcgcgccaaacagtactacggtggaaaccgagaagaagatatccgtaacgtt
gtaccgatcctattgcacggcgacgccgcctttgccgggcaaggggtggtctacgagacc
atgcaaatggccgaggtgcccgattttgacgtcggtggaaccattcacgtcatcatcaac
aatcagattggcttcaccaccaaccccattcattcgcgctcgacgccctactcgtcggat
ttgggcaaggccttcaattgccccatctttcactgtaacggcgacgatcccctagcagtg
tcgacggcactcgagaccgccgtcgaatggcgtcacgaatggggcatggatgttattatc
gagatggtctgctaccgtcgtaacggtcacaacgaactagatcagccggcctttacacaa
ccaaaactctacaaggaaatttctcgacacccaccaaccctggatatttttgaaaagcga
ttgattgaagaaggaaccttgtccaaagaagaatgtcaagagatccgtgactttacgctg
gaaagctacgaaaaggatttcgaagcttccaagacgtatgtgaaaaaagagacggattgg
ttgagctccagatggaccggtttcaaagggccgtcgcagattagtcgtattcgtcctacc
ggcgtggaggttgagactctgcgcaagataggaatccaagctggaacggttccagccgat
tttaaattgcatcgtcaaatggccaaaatcttcaaggcgcgtcgggaaatggcggaaaat
ggcgaaggtattgactggggcactgccgaagccttggcgtttggttcgctcctacttgaa
gggaatcatgtgcgtattaccggtcaagacgttcagcgcggtacctttagtcaccggcac
gccgtcgtcaaggatcagaataccgaagaggaatacactccattgaattttctcgccaaa
aagatggctccaagtgccccacttgaagagctgagcaagacggatacgcaagccggcttc
attgctcgtaattcgattctttccgagtttgctgttcttggatttgagcacgggtacagt
ttggaaaacccgaacgcgctcattttatgggaagcccaatttggtgacttcgtcaatggc
gcgcaagtcttgattgatcagttcatctcgtcaggtgaagacaagtggttgcgccagtct
ggccttgtcatgctgttgccccatgggtacgatggacaaggtgccgaacactctagttgc
cgtgtggagaggtttctgcagcaagtggacgaagatccgcactacattccgcgcttggca
cgggacgaacgtatgcaaattcagcgctgcaattggcaagttgtcaattgcacgaccccg
gcaaattactttcattgtttgcgccgtcagattcatcgtgatttccgtaagccactagta
gtcgtagcaccaaagaacttgcttcgtcacaagcgctgcgtttcgaccttggaagaaatg
ggaccaggtacatccttcaagcgcgtctacgacgagactgatccggcaataagccatcat
ccagagcaagtcaagacgctggtcttttgcactgggcagatatactacgagctcctggcg
gagcgtgaaaaattaggtcgtacggatgtggctctggtgcgtttggaacaaattgctcca
ttcgcgttcgatcggatcgcgaagaatgcgcagaaataccccaatgccgaattgatttgg
gcccaacaagaaccaaagaatatgggagcctatagttatgtattggctcgtatcatgacg
gcgacgcgcgaattaaacggcaacgaaaaacgccctcgctacgtaggccgcccagtcagt
gcggcgccagcgacaggcatgggtaaagtacatcaaatggaatataacaacatcatggcg
ggagtctatggcgtggcgggagatggaggttttgaggactag
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