Phaeodactylum tricornutum: PHATRDRAFT_29824
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Entry
PHATRDRAFT_29824 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_29824
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_29824
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_29824
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PHATRDRAFT_29824
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PHATRDRAFT_29824
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PHATRDRAFT_29824
Prokaryotic type
Other AARSs
PHATRDRAFT_29824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
7195006
NCBI-ProteinID:
XP_002183300
JGI:
29824
UniProt:
B7G888
LinkDB
All DBs
Position
19:136354..142650
Genome browser
AA seq
1177 aa
AA seq
DB search
MSALPPNLDFAATEVEICAKWKQESTFQTQDKLSLDRGDEEFTFYDGPPFATGLPHYGHI
LAGTIKDTVTRYAAMSGKHVSRRAGWDCHGLPVEYEIDQKLNITHRDQVLEMGIDKYNAT
CRSIVTRYTAEWESTVTRLGRWIDFENDYKTMDPSFMESVWWVFRQLFDKNLVYQGYKVM
PYSTACTTPLSNFEAGLNYKDVKDPAVVVSFPILGEPQEVSFVAWTTTPWTLPSNLALCV
NPAMEYVQILDKATNHSFILAKSRLAQLYPIMNNKKKWKPEKAAELYELQATMPGTALVG
KRYQPLFDFFQGEPGSENYWQVVSDSYVTDDAGTGVVHQAPAFGEDDYRVCLAHGIIAKG
GEVPCPVDADGNFVDLIAPVKGMHVKAADEILIQLVKDSGRLVQKDVLLHSYPFCWRSDT
PLIYKAVPSWFVKVEEIRDRIVENNKQTHWVPKEVKEGRFHNWLSDARDWAVSRNRFWGT
PIPIWANDDLSEVVCIGSVDELAELSGVRVEDLHRETVDQITIPSQKTPGGVLRRVDEVF
DCWFESGSMPYAQSHYPFENKEGWEKGFPADFIAEGLDQTRGWFYTLMVLSTALFDKPAF
KNNIVNGMVLASDGQKMSKRKKNYPDPNIVISKYGADALRMYLVNSPVVRAESLKFKEEG
VLGVVKEVFLPLYNAFRFFLQNIERWELEGSSKFVPDLDKVRQTANPTDIWIQAETQGLI
KFVHEEMGAYRLYTVMPALVSFGTQLTNWYVRLNRDRLKGAEGEGQEADIEAETGLQVLY
DVLLNVSMIMAPFTPFITEFFYQHLRKFQPSYLDATNGGGTSNPPMPGKSDSVHFLRLPT
YDETRLNKQVVEAMEALQSVVEQGRNAREKRNINLRTPIKTIVAILRNPADYVVAGITGP
LKRYILSELNVWDFKVVPAEEEHDWVTLALTPDFKVLGKKLGSKMKAVSAAVKGLSHEQA
VKCLEDGKLEIERVALDTATELVSKLTFSREGEHWEATEKPDGSLVVAIDCTQDEAILSA
GRSRELMNAIQQLRKNAGLDLKDVVETFFREEEGVTLVEETVARNVPLFEAKFKGAVPLP
YRFVPKWAVVLKNETVDVGGTKVDVFIFRPAVAVKESLGPSVESVLSTLEPSSLPKGGKF
SFSLDGVSTTLTEGTDFWLSTTDKVRYTKVLAWLKVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacttcctcccaatctcgactttgcggcgaccgaggtcgaaatttgcgcaaaa
tggaaacaggaaagcacgtttcaaacccaggacaagctcagtttggaccgcggtgatgag
gaatttacgttttacgacggacctccgttcgccacgggtctaccccattacggccacatt
ctggccggtaccatcaaagacacggtcacgcggtacgccgccatgtcgggcaagcacgtt
tcccgccgggccggatgggactgtcacggactgcccgtcgagtacgagattgaccaaaaa
ctcaacattacccaccgcgatcaagttttggaaatgggcattgacaagtacaacgccacg
tgccgatcaatcgtcacgcgatacacggcggaatgggaaagtaccgtcacccgactcggt
cgctggattgatttcgaaaacgattacaagaccatggatccgtcctttatggaaagcgtt
tggtgggtctttcgccaattgttcgataagaatctcgtttaccaagggtacaaggtcatg
ccctactcaacggcctgtacaaccccgctcagtaactttgaagctggtttgaactacaag
gacgtcaaagatccggccgtggtggtgagcttccccatactgggcgaaccacaggaagtc
tccttcgtcgcgtggaccaccaccccctggaccttgccgtccaacttggcgctctgcgtc
aaccccgccatggaatacgtacaaatcctcgacaaggcgaccaaccacagctttattctc
gccaaaagtagactggcgcaactgtaccccatcatgaacaacaagaaaaagtggaagccc
gaaaaagccgccgagttgtacgaactccaagcgacaatgccgggtacggcgctggtcggg
aaacgctaccagccgctttttgactttttccagggagagccgggatcggaaaactactgg
caggtcgtgtcggactcctacgtgacggacgatgccggtaccggcgtggtccaccaggca
ccggcctttggagaagacgattaccgtgtctgtctcgcccacggcattatcgccaaggga
ggcgaagttccctgcccggtcgatgccgacggcaactttgtcgatctgattgcacccgtc
aagggcatgcacgtcaaggctgccgacgagattcttattcagctcgtcaaggacagtggc
cgtctggtacagaaggatgtcttgctgcattcgtatcccttttgttggcgttcggatacc
cccttgatctacaaggcggtaccctcgtggttcgtcaaggtggaagagatccgcgaccgc
atcgtggagaacaacaagcaaacacactgggtgcccaaagaggttaaggaaggacgtttc
cacaactggttgtccgacgcccgtgattgggccgtgtcgcggaatcggttctggggaaca
cccatacctatttgggccaacgacgacctctccgaagtagtttgtattggcagtgttgat
gagttggcggaactatccggtgttcgggtggaagatctccaccgcgaaacggtggatcag
atcaccatcccgtcccagaagaccccgggcggcgtcctgcgtcgcgtcgacgaggtgttt
gattgctggttcgaatcgggatccatgccgtacgcacagagccactacccattcgaaaat
aaggagggatgggaaaaggggtttcctgcggatttcattgcggaaggcttggatcaaacg
cgaggttggttctacacattgatggtcttgtccacggctttgttcgacaagcccgcgttc
aaaaacaatatcgttaatggtatggtgttggcatccgacggccagaaaatgtccaagcgc
aaaaagaactatcccgacccgaacattgtaatcagcaaatacggtgcggatgccctccgt
atgtatctggtcaactcccctgtggtacgtgctgagtcgctcaagttcaaggaagaaggc
gtcctgggagtcgtcaaggaggtctttcttccgctctacaatgccttccgcttcttttta
caaaatattgaacggtgggaacttgaaggcagcagcaaattcgtgcccgatcttgacaag
gttcgccagacggcgaaccccaccgatatttggattcaggccgagactcagggtcttatt
aaattcgttcacgaagaaatgggcgcgtaccgactgtacaccgtcatgcccgctctggta
tcgtttggcacacagttaactaactggtacgtgcgtttgaatcgggatcgtctcaaagga
gccgaaggagaaggtcaggaagccgatatcgaggctgaaactggtctgcaggtcctctac
gatgtacttctgaacgtgtccatgattatggctcctttcaccccgtttattaccgagttc
ttttatcaacatttgagaaaattccagccttcctatctagacgctaccaacggagggggc
acctcgaatccgccgatgcctggaaagagtgactcggtccacttcttgcgacttcctact
tatgatgaaactcggttgaacaaacaggtcgtggaagccatggaagctttgcagagtgtg
gtagaacaagggagaaacgctcgggaaaaacggaacattaatctacgcacccccattaaa
actattgttgccattcttcggaatccagcagattacgttgttgctggcatcactggcccg
ctaaagcgatacatcttaagcgaacttaacgtctgggatttcaaggttgtcccggcagag
gaagaacatgattgggtgactctagctttaacacctgatttcaaagttctcggcaaaaag
cttggtagcaagatgaaagctgtgtctgcagcggtcaagggcttgtcacatgaacaagct
gtaaaatgcctcgaagacggaaaactcgagattgaaagagtcgcattggatactgcaaca
gaactcgtttcaaaactcacattttctcgcgagggagaacattgggaagccacggaaaag
ccggacggatctttggtggttgcgatcgactgcacacaggatgaagcaattttgtcggcg
ggaaggtcgcgggagctgatgaatgctattcagcagcttcgaaagaatgccggcctcgat
ctcaaggatgttgttgagactttctttcgtgaagaggaaggtgtgacactcgtggaagaa
acggtagctcgtaacgttccacttttcgaagcaaaattcaaaggtgccgttcctctgcct
taccgttttgtgcccaagtgggcggtggtcttaaagaacgagacagtggacgtgggaggg
acgaaagttgatgtgtttattttcagaccggcagtagctgttaaggaatctctgggtcct
tcagttgagagcgtgctctcaacactggagccctctagtctgccgaaaggtggaaagttt
agcttttccctcgacggagtctcaacaacgttgaccgaaggaactgacttctggctgtct
acaacggataaggtccgatataccaaagtcttggcttggttgaaagtatcatag
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