Phaeodactylum tricornutum: PHATRDRAFT_35063
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Entry
PHATRDRAFT_35063 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_35063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_35063
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_35063
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_35063
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PHATRDRAFT_35063
Spliceosome [BR:
pti03041
]
Complex A
U1 snRNP components
Sm proteins
PHATRDRAFT_35063
U2 snRNP components
PHATRDRAFT_35063
Complex B
U1 snRNP components
PHATRDRAFT_35063
U4/U6.U5 tri-snRNP components
PHATRDRAFT_35063
Complex C
U2 snRNP components
PHATRDRAFT_35063
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PHATRDRAFT_35063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
7199999
NCBI-ProteinID:
XP_002179554
JGI:
35063
UniProt:
B7FXG6
LinkDB
All DBs
Position
6:complement(988720..989399)
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AA seq
165 aa
AA seq
DB search
MPTGKGSKLLRYVEHRLRVTLHDGRSIVGTFLAFDKHLNLVLSEAEEFRTLKSKGGAALL
EERTEKRSLGLVLIRGENVVSLAVEGPPPPSTMGKLTPGGPGMARGAGRGVPSMAPPGAP
PVGLGAAPIHGIGGAGGTFPPPPPPPPGAGMPPPGMGRGMPPPRY
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccggaaagggaagtaagctattgcggtacgtcgagcaccgtctccgcgtaaca
cttcacgatggaaggtcaattgtgggaacctttcttgcgtttgacaagcacctaaatctc
gtcttatccgaagccgaagaattccgtacgttgaaatccaaaggtggcgccgctctgctg
gaagaacgaacggaaaaacgcagtttgggcttggtccttattcgcggagaaaacgtcgtt
agtttagccgtcgaaggcccaccgccaccgtcaacaatgggaaaactgacaccgggcggt
cccggtatggctcggggtgccggacgcggtgtaccttccatggccccacccggggctccg
ccggtagggctgggtgcggcgccaattcacgggattggtggtgccggaggaacatttccg
ccaccgccacccccaccaccgggcgcgggtatgccaccgcctggaatgggacgaggtatg
ccaccgccccgatactga
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