Phaeodactylum tricornutum: PHATRDRAFT_40841
Help
Entry
PHATRDRAFT_40841 CDS
T01075
Symbol
Ran2
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
pti03013
Nucleocytoplasmic transport
pti03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHATRDRAFT_40841 (Ran2)
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_40841 (Ran2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHATRDRAFT_40841 (Ran2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_40841 (Ran2)
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_40841 (Ran2)
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_40841 (Ran2)
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_40841 (Ran2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_40841 (Ran2)
04031 GTP-binding proteins [BR:
pti04031
]
PHATRDRAFT_40841 (Ran2)
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PHATRDRAFT_40841 (Ran2)
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PHATRDRAFT_40841 (Ran2)
Pre-60S particles
PHATRDRAFT_40841 (Ran2)
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PHATRDRAFT_40841 (Ran2)
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
PHATRDRAFT_40841 (Ran2)
Spindle formation proteins
PHATRDRAFT_40841 (Ran2)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_40841 (Ran2)
GTP-binding proteins [BR:
pti04031
]
Small (monomeric) G-proteins
Ran Family
Ran
PHATRDRAFT_40841 (Ran2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
AAA_16
Pox_A32
AAA_24
RNA_helicase
RsgA_GTPase
TsaE
AAA_7
AAA_22
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
7198779
NCBI-ProteinID:
XP_002184885
JGI:
40841
UniProt:
B7GCK0
LinkDB
All DBs
Position
26:complement(75534..76597)
Genome browser
AA seq
254 aa
AA seq
DB search
MGRKVVGVGKKNPPKPSGANNARLRSSKALLTAKSNPALASSQTPEFKLVLIGDSGVGKT
SFVKRHLTGEFEKTFVTTHGAEVHPLLFHTNRGPIKFNVWDTAGTEKFGGLRDGYYIQGQ
CAIIMFDLTSLVTYKSVPNYYKDLTRVCMNIPIVLTGNKTDEIIFPCKKNMQYYEISAKS
NYNCEKPFLSLARQLLGDSQLHFVEAPALQLPETQIDDVQLPETQIDDVTTQNSKAEMLT
AAAPPIPEDDEKTV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaggtcgtcggcgtcggcaagaagaacccaccaaagccttcaggagccaat
aatgcccgactgcgttcgtcgaaagcattgcttactgccaaatcaaatcctgctctagca
agctcccaaactcccgaattcaagctcgttctcattggcgacagcggcgtcggcaagacg
agctttgtcaagcgccatttgacgggcgaattcgaaaagacgttcgtgacaacacacggt
gccgaagtccatcccttacttttccacaccaaccgcggacctatcaaattcaatgtttgg
gacacggcgggaaccgaaaagttcggtggacttcgcgacgggtactacatccagggacag
tgcgccattatcatgttcgaccttacttccctcgttacctacaagagtgttcccaattac
tacaaagatctcacgcgcgtctgcatgaacattcccattgtgctcacgggaaacaaaacg
gatgaaatcatattcccctgtaaaaagaacatgcagtactacgaaatctccgctaaatcc
aactacaactgtgaaaaaccctttctgtctttggcccgccaactccttggagacagtcag
ttgcactttgtggaagcacccgctctacagctgccggaaacgcagatcgatgacgtacag
ctgccggaaacgcagatcgatgatgtcaccacacaaaacagcaaagccgaaatgctgacc
gccgccgccccccctattccggaagatgacgagaaaactgtctaa
DBGET
integrated database retrieval system