Phaeodactylum tricornutum: PHATRDRAFT_44635
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Entry
PHATRDRAFT_44635 CDS
T01075
Symbol
VDE
Name
(RefSeq) violaxanthin deepoxidase
KO
K09839
violaxanthin de-epoxidase [EC:
1.23.5.1
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
Module
pti_M01046
Xanthophyll cycle
Brite
Enzymes [BR:
pti01000
]
1. Oxidoreductases
1.23 Reducing C-O-C group as acceptor
1.23.5 With a quinone or similar compound as acceptor
1.23.5.1 violaxanthin de-epoxidase
PHATRDRAFT_44635 (VDE)
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Motif
Pfam:
VDE
Motif
Other DBs
NCBI-GeneID:
7198121
NCBI-ProteinID:
XP_002178643
JGI:
44635
UniProt:
B7FUR6
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Position
4:complement(1116193..1117626)
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AA seq
437 aa
AA seq
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MKFLGVTSLLCLWSVVNRENVSEAFAPRHQSLSRPSSRTTSAFSRAPILSLRKYDSDSEV
ENDLLSKLNPFQNWQTALQSTALALTIGVASWTSLPTIVPPAFAATTDSKSIVSCLFQKC
PLPLAKCIANPKCLANVVCINTCTGRPDEIECQIECGNLFENEVVGEFNKCVLTDMKCVP
KQGDDGSYPVPAPEIVVPKFDTKFFDGRLYISAGQNKLFDVFPCQVHFFTETEKGKFFGK
LNWRVEQPDGNFFTRDALQEFVQDPNQPGHLINHDNEYLHYEDDWWVIDYEYDGNKDGVP
PFAFVYYRGNNDAWEGYGGVVVYTRAAQLPESLLPRLRVAAEKIGFDFDKDFVITDNTCP
TDLSGKEKQILREKFAGKVALQTEQQLQAQVTRLRGNAVNSIKAQKLFFEQGLEGAQKAY
DALEETEKQFERETSQQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttctcggtgttaccagcttgctttgtctctggtcggtggtcaacagagagaac
gtgagtgaagcctttgcgccccgacaccagtcactctcccgtccatcgtcgagaacgaca
tcggctttctctcgggctccaattttgtcgctccgcaagtacgactcagattcagaggtt
gaaaacgatttactctcgaagctgaatccatttcaaaactggcaaacagctttgcagagt
acagcattggcactaacgattggtgtcgcttcctggacgtcccttcccacaattgtccct
ccagcgtttgccgccaccacggattccaaatccatcgtttcgtgtctcttccagaaatgc
cctctccccctcgccaagtgcattgccaaccccaagtgcctcgccaacgttgtttgcatt
aacacctgtacgggacgaccggacgagattgagtgccagatcgaatgtggaaatctgttc
gaaaatgaagtggtaggtgaattcaataaatgcgtcctgaccgatatgaagtgcgtgccg
aagcagggcgatgacggatcatatcccgttcccgcacccgaaatcgtcgtacccaagttt
gacaccaagttcttcgatggacgactctacatctcagccggacaaaacaaattgttcgat
gtatttccctgccaggtgcacttttttaccgaaaccgaaaagggcaagttcttcggcaaa
ctgaattggcgggtggagcagccagacgggaacttcttcacccgggatgcgctccaagaa
ttcgtgcaagatccgaatcagccgggtcacttgatcaaccacgacaacgaatacctacat
tacgaagacgactggtgggtgattgactacgaatacgacggcaacaaggacggcgtcccc
ccgtttgcgttcgtctactatcgcggcaataacgacgcctgggaaggatacggcggagtc
gtcgtgtacacgcgcgctgcccagctacctgagtctctgttacctcgtttgcgtgtggcc
gccgaaaagattggctttgacttcgacaaagatttcgtcattacggataatacatgtccg
actgatctgagtggcaaagaaaagcaaattttacgcgaaaagtttgccggtaaggttgct
ctgcaaaccgagcaacagttgcaggcccaggtcacacggctacggggaaacgcggtgaat
tccatcaaggcgcaaaagctgttttttgagcaaggtctagaaggtgcgcaaaaggcgtat
gatgccttggaagagacagaaaagcagtttgaacgagaaacctcccagcaataa
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